Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
4
pubmed:dateCreated
2005-4-6
pubmed:abstractText
The Methanocaldococcus jannaschii genome contains putative genes for all four nonoxidative pentose phosphate pathway enzymes. Open reading frame (ORF) MJ0960 is a member of the mipB/talC family of 'transaldolase-like' genes, so named because of their similarity to the well-characterized transaldolase B gene family. However, recently, it has been reported that both the mipB and the talC genes from Escherichia coli encode novel enzymes with fructose-6-phosphate aldolase activity, not transaldolase activity (Schürmann and Sprenger 2001). The same study reports that other members of the mipB/talC family appear to encode transaldolases. To confirm the function of MJ0960 and to clarify the presence of a nonoxidative pentose phosphate pathway in M. jannaschii, we have cloned ORF MJ0960 from M. jannaschii genomic DNA and purified the recombinant protein. MJ0960 encodes a transaldolase and displays no fructose-6-phosphate aldolase activity. It etained full activity for 4 h at 80 degrees C, and for 3 weeks at 25 degrees C. Methanocaldococcus jannaschii transaldolase has a maximal velocity (Vmax) of 1.0 +/- 0.2 micromol min(-1) mg(-1) at 25 degrees C, whereas Vmax = 12.0 +/- 0.5 micromol min(-1) mg(-1) at 50 degrees C. Apparent Michaelis constants at 50 degrees C were Km = 0.65 +/- 0.09 mM for fructose-6-phosphate and Km = 27.8 +/- 4.3 microM for erythrose-4-phosphate. When ribose-5-phosphate replaced erythrose-4-phosphate as an aldose acceptor, Vmax decreased twofold, whereas the Km was 150-fold higher. The molecular mass of the active enzyme is 271 +/- 27 kDa as estimated by gel filtration, whereas the predicted monomer size is 23.96 kDa, suggesting that the native form of the protein is probably a decamer. A readily available source of thermophilic pentose phosphate pathway enzymes including transaldolase may have direct application in enzymatic biohydrogen production.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-10422220, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-10550468, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-10869557, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-10890432, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-11120740, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-11297390, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-11298760, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-12051943, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-12057201, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-12676497, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-2448875, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-7592346, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-7984417, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-8288525, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-8805555, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-9007983, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-9324245, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-9332394, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-9497334, http://linkedlifedata.com/resource/pubmed/commentcorrection/15810435-9883893
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Aldehyde-Lyases, http://linkedlifedata.com/resource/pubmed/chemical/Escherichia coli Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Fructosephosphates, http://linkedlifedata.com/resource/pubmed/chemical/Protein Subunits, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Ribosemonophosphates, http://linkedlifedata.com/resource/pubmed/chemical/Sugar Phosphates, http://linkedlifedata.com/resource/pubmed/chemical/Transaldolase, http://linkedlifedata.com/resource/pubmed/chemical/erythrose 4-phosphate, http://linkedlifedata.com/resource/pubmed/chemical/fructose-6-phosphate, http://linkedlifedata.com/resource/pubmed/chemical/fsaA protein, E coli, http://linkedlifedata.com/resource/pubmed/chemical/ribose-5-phosphate
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
1472-3646
pubmed:author
pubmed:issnType
Print
pubmed:volume
1
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
255-62
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:15810435-Aldehyde-Lyases, pubmed-meshheading:15810435-Amino Acid Sequence, pubmed-meshheading:15810435-Cloning, Molecular, pubmed-meshheading:15810435-Enzyme Stability, pubmed-meshheading:15810435-Escherichia coli, pubmed-meshheading:15810435-Escherichia coli Proteins, pubmed-meshheading:15810435-Fructosephosphates, pubmed-meshheading:15810435-Molecular Sequence Data, pubmed-meshheading:15810435-Molecular Weight, pubmed-meshheading:15810435-Pentose Phosphate Pathway, pubmed-meshheading:15810435-Protein Subunits, pubmed-meshheading:15810435-Recombinant Proteins, pubmed-meshheading:15810435-Ribosemonophosphates, pubmed-meshheading:15810435-Sequence Alignment, pubmed-meshheading:15810435-Substrate Specificity, pubmed-meshheading:15810435-Sugar Phosphates, pubmed-meshheading:15810435-Temperature, pubmed-meshheading:15810435-Transaldolase
pubmed:year
2004
pubmed:articleTitle
Transaldolase of Methanocaldococcus jannaschii.
pubmed:affiliation
Division of Science and Mathematics, University of Minnesota, Morris, 600 E. 4th Street, Morris, MN 56267, USA. soderbt@mrs.umn.edu
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't