Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
2004-12-13
pubmed:abstractText
We recently identified a 3' region of the rad50 gene possessing strong enhancer activity as well as activity consistent with function as a locus control region (LCR) for the flanking Th2 cytokine genes. In this study, we identify several functional elements within this region by examining chromatin changes as well as activity in transgenic mice. We find within this region four DNase I hypersensitive clusters, three of which are highly conserved and predominantly expressed in Th2 cells. Histone acetylation of this region is elevated in Th2 cells. Further, one of the hypersensitive sites (RHS7) is rapidly demethylated in Th2, but not Th1, cells. In transgenic mice, these hypersensitive sites impart strong, Th2-specific enhancer activity as well as copy number-dependent expression of the reporter gene, recapitulating LCR function. We postulate that these sites function alone or in combination with other regulatory elements to coordinate gene expression in the Th2 cytokine locus.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
1074-7613
pubmed:author
pubmed:issnType
Print
pubmed:volume
21
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
865-76
pubmed:dateRevised
2008-11-21
pubmed:meshHeading
pubmed-meshheading:15589174-ATP-Binding Cassette Transporters, pubmed-meshheading:15589174-Acetylation, pubmed-meshheading:15589174-Animals, pubmed-meshheading:15589174-Chromatin Assembly and Disassembly, pubmed-meshheading:15589174-Conserved Sequence, pubmed-meshheading:15589174-Cytokines, pubmed-meshheading:15589174-DNA Repair Enzymes, pubmed-meshheading:15589174-DNA-Binding Proteins, pubmed-meshheading:15589174-Deoxyribonuclease I, pubmed-meshheading:15589174-Enhancer Elements, Genetic, pubmed-meshheading:15589174-Histones, pubmed-meshheading:15589174-Humans, pubmed-meshheading:15589174-Introns, pubmed-meshheading:15589174-Locus Control Region, pubmed-meshheading:15589174-Mice, pubmed-meshheading:15589174-Mice, Inbred C57BL, pubmed-meshheading:15589174-Mice, Transgenic, pubmed-meshheading:15589174-Multigene Family, pubmed-meshheading:15589174-Sequence Homology, Nucleic Acid, pubmed-meshheading:15589174-Th2 Cells
pubmed:year
2004
pubmed:articleTitle
Th2-specific chromatin remodeling and enhancer activity in the Th2 cytokine locus control region.
pubmed:affiliation
Section of Immunobiology and Yale University School of Medicine, New Haven, CT 06520, USA.
pubmed:publicationType
Journal Article