Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
12
pubmed:dateCreated
2004-11-23
pubmed:databankReference
pubmed:abstractText
NAD(+)-dependent glycerol-3-phosphate dehydrogenase (G3PDH) is generally absent in archaea, because archaea, unlike eukaryotes and eubacteria, utilize glycerol-1-phosphate instead of glycerol-3-phosphate for the biosynthesis of membrane lipids. Surprisingly, the genome of the hyperthermophilic archaeon Archaeoglobus fulgidus comprises a G3PDH ortholog, gpsA, most likely due to horizontal gene transfer from a eubacterial organism. Biochemical characterization proved G3PDH-like activity of the recombinant gpsA gene product. However, unlike other G3PDHs, the up to 85 degrees C thermostable A. fulgidus G3PDH exerted a 15-fold preference for NADPH over NADH. The A. fulgidus G3PDH bears the hallmarks of adaptation to halotolerance and thermophilicity, because its 1.7-A crystal structure showed a high surface density for negative charges and 10 additional intramolecular salt bridges compared to a mesophilic G3PDH structure. Whereas all amino acid residues required for dihydroxyacetone phosphate binding and reductive catalysis are highly conserved, the binding site for the adenine moiety of the NAD(P) cosubstrate shows a structural variation that reflects the observed NADPH preference, for example, by a putative salt bridge between R49 and the 2'-phosphate.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-10382966, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-10715215, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-10743613, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-10788369, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-10805563, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-10960477, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-11029001, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-11256505, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-11418771, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-11566129, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-11726492, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-11952791, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-12176390, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-12192072, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-12486729, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-12586344, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-12586398, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-12601138, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-12758080, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-12823816, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-14499608, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-14616063, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-15299354, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-15299374, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-15299926, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-16535556, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-17777850, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-2025413, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-3627230, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-4368490, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-6792201, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-7877172, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-8377180, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-8586635, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-8591026, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-8906967, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-8920004, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-9144788, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-9348086, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-9371463, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-9389475, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-9419225, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-9757107, http://linkedlifedata.com/resource/pubmed/commentcorrection/15557260-9973362
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
0961-8368
pubmed:author
pubmed:issnType
Print
pubmed:volume
13
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3161-71
pubmed:dateRevised
2010-9-20
pubmed:meshHeading
pubmed:year
2004
pubmed:articleTitle
Structural and functional analysis of the gpsA gene product of Archaeoglobus fulgidus: a glycerol-3-phosphate dehydrogenase with an unusual NADP+ preference.
pubmed:affiliation
Max-Planck-Institut für terrestrische Mikrobiologie and Laboratorium für Mikrobiologie, Fachbereich Biologie, Philipps Universität, Marburg, Germany.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't