Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2004-11-3
pubmed:databankReference
pubmed:abstractText
The crystallographic structure of the Pseudomonas denitrificans S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase (SUMT), which is encoded by the cobA gene, has been solved by molecular replacement to 2.7A resolution. SUMT is a branchpoint enzyme that plays a key role in the biosynthesis of modified tetrapyrroles by controlling flux to compounds such as vitamin B(12) and sirohaem, and catalysing the transformation of uroporphyrinogen III into precorrin-2. The overall topology of the enzyme is similar to that of the SUMT module of sirohaem synthase (CysG) and the cobalt-precorrin-4 methyltransferase CbiF and, as with the latter structures, SUMT has the product S-adenosyl-L-homocysteine bound in the crystal. The roles of a number of residues within the SUMT structure are discussed with respect to their conservation either across the broader family of cobalamin biosynthetic methyltransferases or within the sub-group of SUMT members. The D47N, L49A, F106A, T130A, Y183A and M184A variants of SUMT were generated by mutagenesis of the cobA gene, and tested for SAM binding and enzymatic activity. Of these variants, only D47N and L49A bound the co-substrate S-adenosyl-L-methionine. Consequently, all the mutants were severely restricted in their capacity to synthesise precorrin-2, although both the D47N and L49A variants produced significant quantities of precorrin-1, the monomethylated derivative of uroporphyrinogen III. The activity of these variants is interpreted with respect to the structure of the enzyme.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Nov
pubmed:issn
0022-2836
pubmed:author
pubmed:issnType
Print
pubmed:day
19
pubmed:volume
344
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
419-33
pubmed:dateRevised
2008-11-21
pubmed:meshHeading
pubmed-meshheading:15522295-Amino Acid Sequence, pubmed-meshheading:15522295-Amino Acid Substitution, pubmed-meshheading:15522295-Bacterial Proteins, pubmed-meshheading:15522295-Binding Sites, pubmed-meshheading:15522295-Catalysis, pubmed-meshheading:15522295-Crystallography, X-Ray, pubmed-meshheading:15522295-Dimerization, pubmed-meshheading:15522295-Gene Expression Regulation, Enzymologic, pubmed-meshheading:15522295-Genes, Bacterial, pubmed-meshheading:15522295-Genetic Variation, pubmed-meshheading:15522295-Hydrogen Bonding, pubmed-meshheading:15522295-Ligands, pubmed-meshheading:15522295-Methyltransferases, pubmed-meshheading:15522295-Models, Molecular, pubmed-meshheading:15522295-Molecular Sequence Data, pubmed-meshheading:15522295-Molecular Structure, pubmed-meshheading:15522295-Mutagenesis, Site-Directed, pubmed-meshheading:15522295-Protein Conformation, pubmed-meshheading:15522295-Protein Folding, pubmed-meshheading:15522295-Protein Structure, Secondary, pubmed-meshheading:15522295-Protein Structure, Tertiary, pubmed-meshheading:15522295-Protein Subunits, pubmed-meshheading:15522295-Pseudomonas Infections, pubmed-meshheading:15522295-Sequence Homology, Amino Acid, pubmed-meshheading:15522295-Structure-Activity Relationship, pubmed-meshheading:15522295-Substrate Specificity, pubmed-meshheading:15522295-Tetrapyrroles
pubmed:year
2004
pubmed:articleTitle
Structure/function studies on a S-adenosyl-L-methionine-dependent uroporphyrinogen III C methyltransferase (SUMT), a key regulatory enzyme of tetrapyrrole biosynthesis.
pubmed:affiliation
Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, York YO10 5YW, UK.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't