Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
10
pubmed:dateCreated
2004-9-24
pubmed:abstractText
A major outbreak involving an Escherichia coli strain that was resistant to expanded-spectrum cephalosporins occurred in Toronto and surrounding regions in 2000 to 2002. We report the complete sequence of a plasmid, pC15-1a, that was found associated with the outbreak strain. Plasmid pC15-1a is a circular molecule of 92,353 bp consisting of two distinct regions. The first is a 64-kb region that is essentially homologous to the non-R-determinant region of plasmid R100 except for several point mutations, a few small insertions and deletions, and the absence of Tn10. The second is a 28.4-kb multidrug resistance region (MDR) that has replaced the R-determinant region of the R100 progenitor and consists mostly of transposons or partial transposons and five copies of the insertion element IS26. All drug resistance genes found in pC15-1a, including the beta-lactamase genes bla(CTX-M-15), bla(OXA-1), and bla(TEM-1), the tetracycline resistance gene tetA, and aminoglycoside resistance genes aac(6')-Ib and aac(3)-II, are located in the MDR. The bla(CTX-M-15) gene was found downstream of ISEcp1as part of a transposition unit, as determined from the surrounding sequence. Examination of the plasmids from CTX-M-15-harboring strains isolated from hospitals across Canada showed that pC15-1a was found in several strains isolated from a site in western Canada. Comparison of pC15-1a and pCTX15, found in an E. coli strain isolated in India in 1999, revealed that the plasmids had several features in common, including an R100 backbone and several of the resistance genes, including bla(CTX-M-15), bla(TEM-1), bla(OXA-1), tetA, and aac(6')-Ib.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-10223953, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-10547834, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-10720804, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-11120685, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-11384513, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-11451684, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-11470367, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-11585791, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12132385, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12183268, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12205064, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12435721, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12461028, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12726770, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12775683, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12821475, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-12936998, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-13727669, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-14693512, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-15047521, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-2039479, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-3892230, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-5031472, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-7494007, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-8793399, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-9254694, http://linkedlifedata.com/resource/pubmed/commentcorrection/15388431-9559800
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
0066-4804
pubmed:author
pubmed:issnType
Print
pubmed:volume
48
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3758-64
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:15388431-Base Sequence, pubmed-meshheading:15388431-Canada, pubmed-meshheading:15388431-Cloning, Molecular, pubmed-meshheading:15388431-Cross Infection, pubmed-meshheading:15388431-DNA, Bacterial, pubmed-meshheading:15388431-Disease Outbreaks, pubmed-meshheading:15388431-Drug Resistance, Bacterial, pubmed-meshheading:15388431-Electrophoresis, Gel, Pulsed-Field, pubmed-meshheading:15388431-Escherichia coli, pubmed-meshheading:15388431-Escherichia coli Infections, pubmed-meshheading:15388431-Microbial Sensitivity Tests, pubmed-meshheading:15388431-Molecular Sequence Data, pubmed-meshheading:15388431-Ontario, pubmed-meshheading:15388431-Phenotype, pubmed-meshheading:15388431-Plasmids, pubmed-meshheading:15388431-Promoter Regions, Genetic, pubmed-meshheading:15388431-Skilled Nursing Facilities, pubmed-meshheading:15388431-beta-Lactamases
pubmed:year
2004
pubmed:articleTitle
Complete nucleotide sequence of a 92-kilobase plasmid harboring the CTX-M-15 extended-spectrum beta-lactamase involved in an outbreak in long-term-care facilities in Toronto, Canada.
pubmed:affiliation
Nosocomial Infections, National Microbiology Laboratory, 1015 Arlington St., Winnipeg, Manitoba, Canada.
pubmed:publicationType
Journal Article