Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
10
pubmed:dateCreated
2004-9-24
pubmed:databankReference
pubmed:abstractText
Synaptotagmin I has two tandem Ca(2+)-binding C(2) domains, which are essential for fast synchronous synaptic transmission in the central nervous system. We have solved four crystal structures of the C(2)B domain, one of them in the cation-free form at 1.50 A resolution, two in the Ca(2+)-bound form at 1.04 A (two bound Ca(2+) ions) and 1.65 A (three bound Ca(2+) ions) resolution and one in the Sr(2+)-bound form at 1.18 A (one bound Sr(2+) ion) resolution. The side chains of four highly conserved aspartic acids (D303, D309, D363, and D365) and two main chain oxygens (M302:O and Y364:O), together with water molecules, are in direct contact with two bound Ca(2+) ions (sites 1 and 2). At higher Ca(2+) concentrations, the side chain of N333 rotates and cooperates with D309 to generate a third Ca(2+) coordination site (site 3). Divalent cation binding sites 1 and 2 in the C(2)B domain were previously identified from NMR NOE patterns and titration studies, supplemented by site-directed mutation analysis. One difference between the crystal and NMR studies involves D371, which is not involved in coordination with any of the identified Ca(2+) sites in the crystal structures, while it is coordinated to Ca(2+) in site 2 in the NMR structure. In the presence of Sr(2+), which is also capable of triggering exocytosis, but with lower efficiency, only one cation binding site (site 1) was occupied in the crystallographic structure.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-10545502, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-11242035, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-11691996, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-11739399, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-11754837, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-12047220, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-12110842, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-12526776, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-12850216, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-12900172, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-12931189, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-15299374, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-15299926, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-7697723, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-7809151, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-7954835, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-9757107, http://linkedlifedata.com/resource/pubmed/commentcorrection/15340165-9819203
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
0961-8368
pubmed:author
pubmed:issnType
Print
pubmed:volume
13
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2665-72
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:15340165-Amino Acid Sequence, pubmed-meshheading:15340165-Animals, pubmed-meshheading:15340165-Binding Sites, pubmed-meshheading:15340165-Calcium, pubmed-meshheading:15340165-Calcium-Binding Proteins, pubmed-meshheading:15340165-Cations, pubmed-meshheading:15340165-Crystallography, X-Ray, pubmed-meshheading:15340165-EF Hand Motifs, pubmed-meshheading:15340165-Membrane Glycoproteins, pubmed-meshheading:15340165-Molecular Sequence Data, pubmed-meshheading:15340165-Nerve Tissue Proteins, pubmed-meshheading:15340165-Protein Structure, Tertiary, pubmed-meshheading:15340165-Rats, pubmed-meshheading:15340165-Sequence Alignment, pubmed-meshheading:15340165-Strontium, pubmed-meshheading:15340165-Structural Homology, Protein, pubmed-meshheading:15340165-Synaptotagmin I, pubmed-meshheading:15340165-Synaptotagmins
pubmed:year
2004
pubmed:articleTitle
Crystallographic identification of Ca2+ and Sr2+ coordination sites in synaptotagmin I C2B domain.
pubmed:affiliation
Structural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA. chengy@mskcc.org
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S.