Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
2004-6-23
pubmed:abstractText
A single free Cys sidechain in the N-terminal domain of the E. coli arginine repressor was covalently derivatized with S-cysteaminyl-EDTA for site-specific attachment of paramagnetic metal ions. The effects of chelated metal ions were monitored with (15)N-HSQC spectra. Complexation of Co(2+), which has a fast relaxing electron spin, resulted in significant pseudocontact shifts, but also in peak doubling which was attributed to the possibility of forming two different stereoisomers of the EDTA-Co(2+) complex. In contrast, complexation of Cu(2+) or Mn(2+), which have slowly relaxing electron spins, did not produce chemical shift changes and yielded self-consistent sets of paramagnetic relaxation enhancements of the amide protons. T (1) relaxation enhancements with Cu(2+) combined with T (2) relaxation enhancements with Mn(2+) are shown to provide accurate distance restraints ranging from 9 to 25 A. These long-range distance restraints can be used for structural studies inaccessible to NOEs. As an example, the structure of a solvent-exposed loop in the N-terminal domain of the E. coli arginine repressor was refined by paramagnetic restraints. Electronic correlation times of Cu(2+) and Mn(2+) were determined from a comparison of T (1) and T (2) relaxation enhancements.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/ArgR protein, Bacteria, http://linkedlifedata.com/resource/pubmed/chemical/Bacterial Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Chelating Agents, http://linkedlifedata.com/resource/pubmed/chemical/Cobalt, http://linkedlifedata.com/resource/pubmed/chemical/Copper, http://linkedlifedata.com/resource/pubmed/chemical/Cysteine, http://linkedlifedata.com/resource/pubmed/chemical/DNA, http://linkedlifedata.com/resource/pubmed/chemical/Edetic Acid, http://linkedlifedata.com/resource/pubmed/chemical/Gadolinium, http://linkedlifedata.com/resource/pubmed/chemical/Ions, http://linkedlifedata.com/resource/pubmed/chemical/Manganese, http://linkedlifedata.com/resource/pubmed/chemical/Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Protons, http://linkedlifedata.com/resource/pubmed/chemical/Repressor Proteins
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
0925-2738
pubmed:author
pubmed:issnType
Print
pubmed:volume
29
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
351-61
pubmed:dateRevised
2006-11-15
pubmed:meshHeading
pubmed-meshheading:15213433-Bacterial Proteins, pubmed-meshheading:15213433-Chelating Agents, pubmed-meshheading:15213433-Cobalt, pubmed-meshheading:15213433-Copper, pubmed-meshheading:15213433-Cysteine, pubmed-meshheading:15213433-DNA, pubmed-meshheading:15213433-Edetic Acid, pubmed-meshheading:15213433-Electron Spin Resonance Spectroscopy, pubmed-meshheading:15213433-Electrons, pubmed-meshheading:15213433-Escherichia coli, pubmed-meshheading:15213433-Gadolinium, pubmed-meshheading:15213433-Ions, pubmed-meshheading:15213433-Magnetic Resonance Spectroscopy, pubmed-meshheading:15213433-Manganese, pubmed-meshheading:15213433-Models, Chemical, pubmed-meshheading:15213433-Models, Molecular, pubmed-meshheading:15213433-Protein Structure, Tertiary, pubmed-meshheading:15213433-Proteins, pubmed-meshheading:15213433-Protons, pubmed-meshheading:15213433-Repressor Proteins, pubmed-meshheading:15213433-Time Factors
pubmed:year
2004
pubmed:articleTitle
Site-specific labelling with a metal chelator for protein-structure refinement.
pubmed:affiliation
Department of Medical Biochemistry and Biophysics, Karolinska Institute, S-171 77 Stockholm, Sweden.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't