Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
25
pubmed:dateCreated
1992-10-7
pubmed:abstractText
Following an ill-defined activation event, the Arg-Gly-Asp (RGD) recognition site of the platelet integrin, glycoprotein IIb-IIIa (alpha IIb beta 3), can bind to fluid-phase, RGD-containing protein ligands, such as fibrinogen, or to the murine monoclonal IgM, PAC-1, which contains the sequence Arg-Tyr-Asp (RYD) within the third complementarity-determining region of its heavy chain (H3). PAC-1 has thus become a widely exploited marker of platelet alpha IIb beta 3 activation. In this report, we compare PAC-1 with two murine IgG, OP-G2 (IgG1 kappa) and LJ-CP3 (IgG1 kappa), that also contain the sequence RYD in H3 but bind to alpha IIb beta 3 without prior activation. Each antibody can inhibit the binding of the other two to intact platelets or to purified IIb-IIIa, the binding of each antibody is completely inhibited by peptides containing RGD, and H3 of each antibody uses the germline D-gene DSP 2.10 (CTATAGGTACGAC) which includes the sequence RYD. Two other murine IgG, HP20 and PCG1-1, cloned and sequenced by other laboratories, also utilize the DSP 2.10 sequence, but neither antibody binds to alpha IIb beta 3. From a comparison of the H3 sequences of these antibodies, we have developed a molecular model of the H3 loop region which can explain these differences in specificity. This model predicts that both the ability to bind to alpha IIb beta 3 and the activation dependence of that binding are a function of the orientation and, therefore, accessibility of the RYD sequence. This model and refinements thereof can be exploited to study the molecular basis for specificity and affinity of RGD-containing ligands for integrins.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Antibodies, Monoclonal, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin G, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin Heavy Chains, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin Variable Region, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin kappa-Chains, http://linkedlifedata.com/resource/pubmed/chemical/Integrins, http://linkedlifedata.com/resource/pubmed/chemical/Ligands, http://linkedlifedata.com/resource/pubmed/chemical/Oligodeoxyribonucleotides, http://linkedlifedata.com/resource/pubmed/chemical/Oligopeptides, http://linkedlifedata.com/resource/pubmed/chemical/Platelet Membrane Glycoproteins, http://linkedlifedata.com/resource/pubmed/chemical/arginyl-glycyl-aspartic acid
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
0021-9258
pubmed:author
pubmed:issnType
Print
pubmed:day
5
pubmed:volume
267
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
18085-92
pubmed:dateRevised
2007-11-14
pubmed:meshHeading
pubmed-meshheading:1517241-Amino Acid Sequence, pubmed-meshheading:1517241-Animals, pubmed-meshheading:1517241-Antibodies, Monoclonal, pubmed-meshheading:1517241-Antibody Specificity, pubmed-meshheading:1517241-Base Sequence, pubmed-meshheading:1517241-Blood Platelets, pubmed-meshheading:1517241-Cloning, Molecular, pubmed-meshheading:1517241-Genes, Immunoglobulin, pubmed-meshheading:1517241-Humans, pubmed-meshheading:1517241-Immunoglobulin G, pubmed-meshheading:1517241-Immunoglobulin Heavy Chains, pubmed-meshheading:1517241-Immunoglobulin Variable Region, pubmed-meshheading:1517241-Immunoglobulin kappa-Chains, pubmed-meshheading:1517241-Integrins, pubmed-meshheading:1517241-Ligands, pubmed-meshheading:1517241-Mice, pubmed-meshheading:1517241-Models, Molecular, pubmed-meshheading:1517241-Molecular Sequence Data, pubmed-meshheading:1517241-Oligodeoxyribonucleotides, pubmed-meshheading:1517241-Oligopeptides, pubmed-meshheading:1517241-Platelet Membrane Glycoproteins, pubmed-meshheading:1517241-Polymerase Chain Reaction, pubmed-meshheading:1517241-Protein Conformation, pubmed-meshheading:1517241-Sequence Homology, Nucleic Acid, pubmed-meshheading:1517241-X-Ray Diffraction
pubmed:year
1992
pubmed:articleTitle
A molecular model of RGD ligands. Antibody D gene segments that direct specificity for the integrin alpha IIb beta 3.
pubmed:affiliation
Blood Research Institute of the Blood Center of Southeastern Wisconsin, Milwaukee 53233.
pubmed:publicationType
Journal Article, Comparative Study, Research Support, U.S. Gov't, P.H.S.