rdf:type |
|
lifeskim:mentions |
umls-concept:C0035711,
umls-concept:C0043309,
umls-concept:C0205314,
umls-concept:C0332462,
umls-concept:C0441587,
umls-concept:C0678594,
umls-concept:C0679622,
umls-concept:C1514562,
umls-concept:C1537998,
umls-concept:C1880389,
umls-concept:C1883204,
umls-concept:C1883221,
umls-concept:C2606649
|
pubmed:issue |
1-3
|
pubmed:dateCreated |
2004-5-11
|
pubmed:abstractText |
Pseudouridine synthases catalyse the isomerisation of uridine to pseudouridine in structural RNA. The pseudouridine synthase TruD, that modifies U13 in tRNA, belongs to a recently identified and large family of pseudouridine synthases present in all kingdoms of life. We report here the crystal structure of Escherichia coli TruD at 2.0 A resolution. The structure reveals an overall V-shaped molecule with an RNA-binding cleft formed between two domains: a catalytic domain and an insertion domain. The catalytic domain has a fold similar to that of the catalytic domains of previously characterised pseudouridine synthases, whereas the insertion domain displays a novel fold.
|
pubmed:language |
eng
|
pubmed:journal |
|
pubmed:citationSubset |
IM
|
pubmed:chemical |
|
pubmed:status |
MEDLINE
|
pubmed:month |
May
|
pubmed:issn |
0014-5793
|
pubmed:author |
|
pubmed:issnType |
Print
|
pubmed:day |
7
|
pubmed:volume |
565
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
59-64
|
pubmed:dateRevised |
2006-11-15
|
pubmed:meshHeading |
pubmed-meshheading:15135053-Amino Acid Sequence,
pubmed-meshheading:15135053-Catalytic Domain,
pubmed-meshheading:15135053-Crystallography, X-Ray,
pubmed-meshheading:15135053-Electrons,
pubmed-meshheading:15135053-Escherichia coli,
pubmed-meshheading:15135053-Escherichia coli Proteins,
pubmed-meshheading:15135053-Intramolecular Transferases,
pubmed-meshheading:15135053-Models, Molecular,
pubmed-meshheading:15135053-Molecular Sequence Data,
pubmed-meshheading:15135053-Protein Conformation,
pubmed-meshheading:15135053-Protein Folding,
pubmed-meshheading:15135053-Protein Structure, Tertiary,
pubmed-meshheading:15135053-RNA, Transfer,
pubmed-meshheading:15135053-Saccharomyces cerevisiae Proteins,
pubmed-meshheading:15135053-Sequence Homology, Amino Acid
|
pubmed:year |
2004
|
pubmed:articleTitle |
X-ray structure of tRNA pseudouridine synthase TruD reveals an inserted domain with a novel fold.
|
pubmed:affiliation |
Department of Biochemistry and Biophysics, Stockholm University, Roslagstullsbacken 15, SE-114 21 Stockholm, Sweden.
|
pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
|