Source:http://linkedlifedata.com/resource/pubmed/id/14745533
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
6
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pubmed:dateCreated |
2004-1-27
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pubmed:abstractText |
Various retroviruses have been shown to encode dUTPase. The overall phylogeny of dUTPase is unclear, though. The human genome contains a significant amount of human endogenous retroviruses (HERV) representing fossilized sequences of ancient exogenous retroviruses. A few HERV families have been reported to harbor dUTPase domains. We surveyed the various HERV families for the presence of dUTPase and found that ancestors of all HERV-K families but one encoded dUTPase. With two exceptions phylogenetic analysis shows a monophyletic origin of dUTPase for the different HERV-K dUTPases. Sequences of consensus dUTPase domains suggest that the various exogenous ancestors of HERV-K once encoded active enzymes. Our analysis provides informations on dUTPase phylogeny and further shows that endogenous retroviruses provide important informations regarding retrovirus evolution.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Dec
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pubmed:issn |
0022-2844
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
57
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
642-9
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:14745533-Amino Acid Sequence,
pubmed-meshheading:14745533-Consensus Sequence,
pubmed-meshheading:14745533-Databases, Nucleic Acid,
pubmed-meshheading:14745533-Endogenous Retroviruses,
pubmed-meshheading:14745533-Endopeptidases,
pubmed-meshheading:14745533-Genome, Human,
pubmed-meshheading:14745533-Humans,
pubmed-meshheading:14745533-Molecular Sequence Data,
pubmed-meshheading:14745533-Open Reading Frames,
pubmed-meshheading:14745533-Phylogeny,
pubmed-meshheading:14745533-Proviruses,
pubmed-meshheading:14745533-Pyrophosphatases,
pubmed-meshheading:14745533-Sequence Alignment,
pubmed-meshheading:14745533-Sequence Homology, Amino Acid,
pubmed-meshheading:14745533-Viral Proteins
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pubmed:year |
2003
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pubmed:articleTitle |
Presence of dUTPase in the various human endogenous retrovirus K (HERV-K) families.
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pubmed:affiliation |
Human Genetics, Building 60, University of Saar, Medical Faculty, 66421 Homburg, Germany. jens.mayer@uniklinik-saarland.de
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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