Source:http://linkedlifedata.com/resource/pubmed/id/14710846
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
20
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pubmed:dateCreated |
2004-1-8
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pubmed:abstractText |
A strategy is proposed for the rapid identification of Bacillus spores, which relies on the selective release of a family of proteins, referred to as small, acid-soluble spore proteins (SASPs). In this work, SASPs were selectively solubilized from Bacillus spores on the MALDI sample plate by using 10% TFA. Proteolytic digests of SASPs generated in situ from spores of B. subtilis 168, B. globigii, B. thuringiensis subs. Kurstaki HD-1, B. cereus T, and the nonpathogenic strain B. anthracis Sterne were prepared in 5-25 min by using trypsin immobilized on Agarose beads and subsequently analyzed by MALDI-TOFMS using a curved-field reflectron. Protein identification was obtained by partial sequencing of distinctive tryptic peptides from Bacillus spores via post-source decay analysis combined with genome-based database searches by Mascot Sequence Query. Various unique SASPs were identified, allowing the characterization of Bacillus species by obtaining sequence-specific information on single peptides. The applicability of this approach for the rapid identification of Bacillus species was further established by analyzing spore mixtures.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Oct
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pubmed:issn |
0003-2700
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
15
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pubmed:volume |
75
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
5618-27
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:14710846-Amino Acid Sequence,
pubmed-meshheading:14710846-Bacillus,
pubmed-meshheading:14710846-Bacillus anthracis,
pubmed-meshheading:14710846-Bacillus cereus,
pubmed-meshheading:14710846-Bacillus subtilis,
pubmed-meshheading:14710846-Bacillus thuringiensis,
pubmed-meshheading:14710846-Bacterial Proteins,
pubmed-meshheading:14710846-Databases, Protein,
pubmed-meshheading:14710846-Molecular Sequence Data,
pubmed-meshheading:14710846-Molecular Weight,
pubmed-meshheading:14710846-Peptide Fragments,
pubmed-meshheading:14710846-Spectrometry, Mass, Matrix-Assisted Laser...,
pubmed-meshheading:14710846-Spores, Bacterial,
pubmed-meshheading:14710846-Trifluoroacetic Acid,
pubmed-meshheading:14710846-Trypsin
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pubmed:year |
2003
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pubmed:articleTitle |
Characterization of Bacillus spore species and their mixtures using postsource decay with a curved-field reflectron.
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pubmed:affiliation |
Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, USA. bwarscheid@hotmail.com
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, Non-P.H.S.,
Research Support, Non-U.S. Gov't
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