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rdf:type |
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lifeskim:mentions |
umls-concept:C0013879,
umls-concept:C0015576,
umls-concept:C0017262,
umls-concept:C0179400,
umls-concept:C0185117,
umls-concept:C0205369,
umls-concept:C0242772,
umls-concept:C0449774,
umls-concept:C0680022,
umls-concept:C1333360,
umls-concept:C1516240,
umls-concept:C1880371,
umls-concept:C2911684
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pubmed:issue |
1-3
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pubmed:dateCreated |
2003-8-25
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pubmed:abstractText |
Four new members of the ERF (ethylene-response factor) family of plant-specific DNA-binding (GCC box) factors were isolated from tomato fruit (LeERF1-4). Phylogenetic analysis indicated that LeERF2 belongs to a new ERF class, characterized by a conserved N-terminal signature sequence. Expression patterns and cis/trans binding affinities differed between the LeERFs. Combining experimental data and modeled three-dimensional analysis, it was shown that binding affinity of the LeERFs was affected by both the variation of nucleotides surrounding the DNA cis-element sequence and the nature of critical amino acid residues within the ERF domain.
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:month |
Aug
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pubmed:issn |
0014-5793
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pubmed:author |
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pubmed:issnType |
Print
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pubmed:day |
28
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pubmed:volume |
550
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
149-54
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pubmed:dateRevised |
2011-10-7
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pubmed:meshHeading |
pubmed-meshheading:12935902-Amino Acid Sequence,
pubmed-meshheading:12935902-Arabidopsis Proteins,
pubmed-meshheading:12935902-Base Sequence,
pubmed-meshheading:12935902-Binding Sites,
pubmed-meshheading:12935902-DNA, Plant,
pubmed-meshheading:12935902-DNA-Binding Proteins,
pubmed-meshheading:12935902-Ethylenes,
pubmed-meshheading:12935902-Gene Expression Regulation, Plant,
pubmed-meshheading:12935902-Lycopersicon esculentum,
pubmed-meshheading:12935902-Models, Molecular,
pubmed-meshheading:12935902-Molecular Sequence Data,
pubmed-meshheading:12935902-Multigene Family,
pubmed-meshheading:12935902-Nuclear Proteins,
pubmed-meshheading:12935902-Organ Specificity,
pubmed-meshheading:12935902-Plant Proteins,
pubmed-meshheading:12935902-Protein Conformation,
pubmed-meshheading:12935902-Regulatory Sequences, Nucleic Acid,
pubmed-meshheading:12935902-Sequence Analysis, DNA,
pubmed-meshheading:12935902-Transcription Factors
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pubmed:year |
2003
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pubmed:articleTitle |
New members of the tomato ERF family show specific expression pattern and diverse DNA-binding capacity to the GCC box element.
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pubmed:affiliation |
UMR 990 INRA/INP-ENSAT, Pole de Biotechnologie Végétale, 24 Chemin de Borde Rouge, P.O. Box 107, 31326 Castanet Tolosan Cedex, France.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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