Source:http://linkedlifedata.com/resource/pubmed/id/12851400
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
41
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pubmed:dateCreated |
2003-10-6
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pubmed:abstractText |
The leader RNA sequence of human immunodeficiency virus type 1 (HIV-1) consists of a complex series of stem loop structures that are critical for viral replication. Three-dimensional structural analysis by NMR of one of these structures, the SL1 stem loop of the packaging signal region, revealed a highly conserved purine rich loop with a structure nearly identical to the Rev-binding loop of the Rev response element. Using band-shift assays, surface plasmon resonance, and further NMR analysis, we demonstrate that this loop binds Rev. HIV-1 appears to have a second Rev-binding site close to the major splice donor site that may have an additional role in the viral life cycle.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Oct
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pubmed:issn |
0021-9258
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
10
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pubmed:volume |
278
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
40385-91
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pubmed:dateRevised |
2007-11-15
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pubmed:meshHeading |
pubmed-meshheading:12851400-5' Untranslated Regions,
pubmed-meshheading:12851400-Amino Acid Sequence,
pubmed-meshheading:12851400-Base Sequence,
pubmed-meshheading:12851400-Binding Sites,
pubmed-meshheading:12851400-Gene Products, rev,
pubmed-meshheading:12851400-Genes, env,
pubmed-meshheading:12851400-HIV-1,
pubmed-meshheading:12851400-Molecular Sequence Data,
pubmed-meshheading:12851400-Mutagenesis,
pubmed-meshheading:12851400-Nuclear Magnetic Resonance, Biomolecular,
pubmed-meshheading:12851400-Nucleic Acid Conformation,
pubmed-meshheading:12851400-RNA, Viral,
pubmed-meshheading:12851400-Sequence Deletion,
pubmed-meshheading:12851400-Surface Plasmon Resonance,
pubmed-meshheading:12851400-rev Gene Products, Human Immunodeficiency Virus
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pubmed:year |
2003
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pubmed:articleTitle |
Rev binds specifically to a purine loop in the SL1 region of the HIV-1 leader RNA.
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pubmed:affiliation |
Medical Research Council Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, United Kingdom.
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pubmed:publicationType |
Journal Article,
In Vitro,
Research Support, U.S. Gov't, P.H.S.,
Research Support, Non-U.S. Gov't
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