Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
13
pubmed:dateCreated
2003-6-25
pubmed:abstractText
RNA secondary structures are important in many biological processes and efficient structure prediction can give vital directions for experimental investigations. Many available programs for RNA secondary structure prediction only use a single sequence at a time. This may be sufficient in some applications, but often it is possible to obtain related RNA sequences with conserved secondary structure. These should be included in structural analyses to give improved results. This work presents a practical way of predicting RNA secondary structure that is especially useful when related sequences can be obtained. The method improves a previous algorithm based on an explicit evolutionary model and a probabilistic model of structures. Predictions can be done on a web server at http://www.daimi.au.dk/~compbio/pfold.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-10329189, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-10369773, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-10383470, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-10404627, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-10518612, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-10648793, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-10964574, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-11125083, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-11752288, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-11801179, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-12079347, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-12520023, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-12520048, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-1695107, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-1920447, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-2482418, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-3447015, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-6163133, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-7288891, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-7524072, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-7984417, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-8676741, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-9278497, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-9399820, http://linkedlifedata.com/resource/pubmed/commentcorrection/12824339-9847214
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
1362-4962
pubmed:author
pubmed:issnType
Electronic
pubmed:day
1
pubmed:volume
31
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3423-8
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2003
pubmed:articleTitle
Pfold: RNA secondary structure prediction using stochastic context-free grammars.
pubmed:affiliation
BiRC (Bioinformatics Research Center), University of Aarhus, Høegh Guldbergsgade 10, Building 090, 8000 Arhus C, Denmark. bk@birc.dk
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Evaluation Studies