Source:http://linkedlifedata.com/resource/pubmed/id/12798239
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
2
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pubmed:dateCreated |
2003-6-11
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pubmed:abstractText |
A single tube nested 'hanging droplet' PCR was developed for detection of cutaneous human papillomavirus (HPV) DNA of the phylogenetic group B1. The nested PCR was compared with a single round PCR method by testing 56 fresh biopsies from Australian skin tumour patients. HPV DNA was detected in 64% (36/56) of the biopsies by nested PCR and in 30% (17/56) by single round PCR (P<0.001). HPV DNA was more often detected by nested PCR than by single round PCR in basal cell carcinoma [62% (16/26) vs. 19%; (5/26); P=0.003], squamous cell carcinoma [43% (7/16) vs. 25% (4/16)] and in solar keratosis [93% (13/14) vs. 57% (8/14); P=0.038]. The nested PCR and the single round PCR system detected 26 and 11 different HPV types/putative types/subtypes, respectively. Multiple types were found in eight samples by the nested PCR and two samples by single round PCR. The nested HPV PCR is more sensitive and capable of amplifying a broad spectrum of HPV types from skin tumours, but further improvements are needed before all HPV infections in skin can be detected by a single assay.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Jun
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pubmed:issn |
0166-0934
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
30
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pubmed:volume |
110
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
129-36
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:12798239-Australia,
pubmed-meshheading:12798239-Biopsy,
pubmed-meshheading:12798239-Carcinoma, Basal Cell,
pubmed-meshheading:12798239-Carcinoma, Squamous Cell,
pubmed-meshheading:12798239-DNA, Viral,
pubmed-meshheading:12798239-Humans,
pubmed-meshheading:12798239-Keratosis,
pubmed-meshheading:12798239-Papillomaviridae,
pubmed-meshheading:12798239-Papillomavirus Infections,
pubmed-meshheading:12798239-Polymerase Chain Reaction,
pubmed-meshheading:12798239-Sensitivity and Specificity,
pubmed-meshheading:12798239-Skin Neoplasms,
pubmed-meshheading:12798239-Tumor Virus Infections
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pubmed:year |
2003
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pubmed:articleTitle |
Improved detection of cutaneous human papillomavirus DNA by single tube nested 'hanging droplet' PCR.
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pubmed:affiliation |
Department of Medical Microbiology, Malmö University Hospital, Lund University, SE-20502, Malmö, Sweden. ola.forslund@mikrobiol.mas.lu.se
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't,
Evaluation Studies
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