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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
2003-3-13
pubmed:databankReference
pubmed:abstractText
Parkin, a product of the causative gene of autosomal-recessive juvenile parkinsonism (AR-JP), is a RING-type E3 ubiquitin ligase and has an amino-terminal ubiquitin-like (Ubl) domain. Although a single mutation that causes an Arg to Pro substitution at position 42 of the Ubl domain (the Arg 42 mutation) has been identified in AR-JP patients, the function of this domain is not clear. In this study, we determined the three-dimensional structure of the Ubl domain of parkin by NMR, in particular by extensive use of backbone (15)N-(1)H residual dipolar-coupling data. Inspection of chemical-shift-perturbation data showed that the parkin Ubl domain binds the Rpn10 subunit of 26S proteasomes via the region of parkin that includes position 42. Our findings suggest that the Arg 42 mutation induces a conformational change in the Rpn10-binding site of Ubl, resulting in impaired proteasomal binding of parkin, which could be the cause of AR-JP.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-10488153, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-10688918, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-10824074, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-10888878, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-10921894, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-10973942, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-10983987, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11078524, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11222788, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11406394, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11431533, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11439185, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11500370, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11584278, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11590439, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11827521, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-11961560, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-12018481, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-12062168, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-12198498, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-12200120, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-2855369, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-4735177, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-8125911, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-9008363, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-9424305, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-9485444, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-9488668, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-9560156, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-9654491, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-9697412, http://linkedlifedata.com/resource/pubmed/commentcorrection/12634850-9757107
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
1469-221X
pubmed:author
pubmed:issnType
Print
pubmed:volume
4
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
301-6
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:12634850-Amino Acid Sequence, pubmed-meshheading:12634850-Amino Acid Substitution, pubmed-meshheading:12634850-Binding Sites, pubmed-meshheading:12634850-Carrier Proteins, pubmed-meshheading:12634850-Genes, Recessive, pubmed-meshheading:12634850-Humans, pubmed-meshheading:12634850-Ligases, pubmed-meshheading:12634850-Models, Molecular, pubmed-meshheading:12634850-Molecular Sequence Data, pubmed-meshheading:12634850-Mutagenesis, Site-Directed, pubmed-meshheading:12634850-Parkinsonian Disorders, pubmed-meshheading:12634850-Peptide Hydrolases, pubmed-meshheading:12634850-Proteasome Endopeptidase Complex, pubmed-meshheading:12634850-Protein Conformation, pubmed-meshheading:12634850-Sequence Alignment, pubmed-meshheading:12634850-Sequence Homology, Amino Acid, pubmed-meshheading:12634850-Ubiquitin, pubmed-meshheading:12634850-Ubiquitin-Protein Ligases
pubmed:year
2003
pubmed:articleTitle
Parkin binds the Rpn10 subunit of 26S proteasomes through its ubiquitin-like domain.
pubmed:affiliation
Department of Structural Biology and Biomolecular Engineering, Graduate School of Pharmaceutical Sciences, Nagoya City University, 3-1 Tanabe-dori, Mizuho-ku, Nagoya 467-8603, Japan.
pubmed:publicationType
Journal Article
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