Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
20
pubmed:dateCreated
2003-5-12
pubmed:abstractText
The multifunctional DNA- and RNA-associated Y-box protein 1 (YB-1) specifically binds to splicing recognition motifs and regulates alternative splice site selection. Here, we identify the arginine/serine-rich SRp30c protein as an interacting protein of YB-1 by performing a two-hybrid screen against a human mesangial cell cDNA library. Co-immunoprecipitation studies confirm a direct interaction of tagged proteins YB-1 and SRp30c in the absence of RNA via two independent protein domains of YB-1. A high affinity interaction is conferred through the N-terminal region. We show that the subcellular YB-1 localization is dependent on the cellular SRp30c content. In proliferating cells, YB-1 localizes to the cytoplasm, whereas FLAG-SRp30c protein is detected in the nucleus. After overexpression of YB-1 and FLAG-SRp30c, both proteins are co-localized in the nucleus, and this requires the N-terminal region of YB-1. Heat shock treatment of cells, a condition under which SRp30c accumulates in stress-induced Sam68 nuclear bodies, abrogates the co-localization and YB-1 shuttles back to the cytoplasm. Finally, the functional relevance of the YB-1/SRp30c interaction for in vivo splicing is demonstrated in the E1A minigene model system. Here, changes in splice site selection are detected, that is, overexpression of YB-1 is accompanied by preferential 5' splicing site selection and formation of the 12 S isoform.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Adenovirus E1A Proteins, http://linkedlifedata.com/resource/pubmed/chemical/CCAAT-Enhancer-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/DNA, Complementary, http://linkedlifedata.com/resource/pubmed/chemical/DNA-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/NFI Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/Nuclear Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Phosphoproteins, http://linkedlifedata.com/resource/pubmed/chemical/Protein Isoforms, http://linkedlifedata.com/resource/pubmed/chemical/RNA, Messenger, http://linkedlifedata.com/resource/pubmed/chemical/RNA-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/Y-Box-Binding Protein 1, http://linkedlifedata.com/resource/pubmed/chemical/YBX1 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/serine-arginine-rich splicing...
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0021-9258
pubmed:author
pubmed:issnType
Print
pubmed:day
16
pubmed:volume
278
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
18241-8
pubmed:dateRevised
2007-5-9
pubmed:meshHeading
pubmed-meshheading:12604611-Adenovirus E1A Proteins, pubmed-meshheading:12604611-Alternative Splicing, pubmed-meshheading:12604611-Binding Sites, pubmed-meshheading:12604611-CCAAT-Enhancer-Binding Proteins, pubmed-meshheading:12604611-Cell Division, pubmed-meshheading:12604611-Cell Line, pubmed-meshheading:12604611-Cell Nucleus, pubmed-meshheading:12604611-Cytoplasm, pubmed-meshheading:12604611-DNA, Complementary, pubmed-meshheading:12604611-DNA-Binding Proteins, pubmed-meshheading:12604611-Gene Library, pubmed-meshheading:12604611-Glomerular Mesangium, pubmed-meshheading:12604611-HeLa Cells, pubmed-meshheading:12604611-Humans, pubmed-meshheading:12604611-Microscopy, Fluorescence, pubmed-meshheading:12604611-NFI Transcription Factors, pubmed-meshheading:12604611-Nuclear Proteins, pubmed-meshheading:12604611-Phosphoproteins, pubmed-meshheading:12604611-Plasmids, pubmed-meshheading:12604611-Precipitin Tests, pubmed-meshheading:12604611-Protein Binding, pubmed-meshheading:12604611-Protein Isoforms, pubmed-meshheading:12604611-Protein Structure, Tertiary, pubmed-meshheading:12604611-RNA, Messenger, pubmed-meshheading:12604611-RNA-Binding Proteins, pubmed-meshheading:12604611-Transcription Factors, pubmed-meshheading:12604611-Two-Hybrid System Techniques, pubmed-meshheading:12604611-Y-Box-Binding Protein 1
pubmed:year
2003
pubmed:articleTitle
Splicing factor SRp30c interaction with Y-box protein-1 confers nuclear YB-1 shuttling and alternative splice site selection.
pubmed:affiliation
Division of Nephrology and Clinical Immunology, University Hospital of Aachen, 52057 Aachen, Germany.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't