rdf:type |
|
lifeskim:mentions |
umls-concept:C0035553,
umls-concept:C0040715,
umls-concept:C0337076,
umls-concept:C0337112,
umls-concept:C0449258,
umls-concept:C0599718,
umls-concept:C0599813,
umls-concept:C0599893,
umls-concept:C0678594,
umls-concept:C0678616,
umls-concept:C1522702,
umls-concept:C1524075,
umls-concept:C1527178
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pubmed:issue |
1
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pubmed:dateCreated |
2003-1-21
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pubmed:databankReference |
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pubmed:abstractText |
Crystal structures of tRNA mimics complexed with the large ribosomal subunit of Deinococcus radiodurans indicate that remote interactions determine the precise orientation of tRNA in the peptidyl-transferase center (PTC). The PTC tolerates various orientations of puromycin derivatives and its flexibility allows the conformational rearrangements required for peptide-bond formation. Sparsomycin binds to A2602 and alters the PTC conformation. H69, the intersubunit-bridge connecting the PTC and decoding site, may also participate in tRNA placement and translocation. A spiral rotation of the 3' end of the A-site tRNA around a 2-fold axis of symmetry identified within the PTC suggests a unified ribosomal machinery for peptide-bond formation, A-to-P-site translocation, and entrance of nascent proteins into the exit tunnel. Similar 2-fold related regions, detected in all known structures of large ribosomal subunits, indicate the universality of this mechanism.
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pubmed:grant |
|
pubmed:language |
eng
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pubmed:journal |
|
pubmed:citationSubset |
IM
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pubmed:chemical |
|
pubmed:status |
MEDLINE
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pubmed:month |
Jan
|
pubmed:issn |
1097-2765
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pubmed:author |
pubmed-author:AgmonIlanaI,
pubmed-author:AuerbachTamarT,
pubmed-author:BartelsHeikeH,
pubmed-author:BashanAnatA,
pubmed-author:BerisioRitaR,
pubmed-author:FranceschiFrancoisF,
pubmed-author:HansenHarly A SHA,
pubmed-author:HarmsJoergJ,
pubmed-author:KesslerMaggieM,
pubmed-author:KossoyElizavetaE,
pubmed-author:SchluenzenFrankF,
pubmed-author:YonathAdaA,
pubmed-author:ZarivachRazR
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pubmed:issnType |
Print
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pubmed:volume |
11
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
91-102
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pubmed:dateRevised |
2007-11-14
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pubmed:meshHeading |
pubmed-meshheading:12535524-Bacterial Proteins,
pubmed-meshheading:12535524-Catalytic Domain,
pubmed-meshheading:12535524-Crystallography, X-Ray,
pubmed-meshheading:12535524-Deinococcus,
pubmed-meshheading:12535524-Models, Molecular,
pubmed-meshheading:12535524-Molecular Structure,
pubmed-meshheading:12535524-Nucleic Acid Conformation,
pubmed-meshheading:12535524-Protein Biosynthesis,
pubmed-meshheading:12535524-Protein Conformation,
pubmed-meshheading:12535524-Protein Synthesis Inhibitors,
pubmed-meshheading:12535524-Puromycin,
pubmed-meshheading:12535524-RNA, Transfer, Amino Acyl,
pubmed-meshheading:12535524-Ribosomal Proteins,
pubmed-meshheading:12535524-Sparsomycin
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pubmed:year |
2003
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pubmed:articleTitle |
Structural basis of the ribosomal machinery for peptide bond formation, translocation, and nascent chain progression.
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pubmed:affiliation |
Department of Structural Biology, Weizmann Institute, 76100 Rehovot, Israel.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.,
Research Support, Non-U.S. Gov't
|