Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
1
pubmed:dateCreated
2003-1-21
pubmed:abstractText
Cryptochrome flavoproteins, which share sequence homology with light-dependent DNA repair photolyases, function as photoreceptors in plants and circadian clock components in animals. Here, we coupled sequencing of an Arabidopsis cryptochrome gene with phylogenetic, structural, and functional analyses to identify a new cryptochrome class (cryptochrome DASH) in bacteria and plants, suggesting that cryptochromes evolved before the divergence of eukaryotes and prokaryotes. The cryptochrome crystallographic structure, reported here for Synechocystis cryptochrome DASH, reveals commonalities with photolyases in DNA binding and redox-dependent function, despite distinct active-site and interaction surface features. Whole genome transcriptional profiling together with experimental confirmation of DNA binding indicated that Synechocystis cryptochrome DASH functions as a transcriptional repressor.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jan
pubmed:issn
1097-2765
pubmed:author
pubmed:issnType
Print
pubmed:volume
11
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
59-67
pubmed:dateRevised
2009-11-19
pubmed:meshHeading
pubmed-meshheading:12535521-Amino Acid Sequence, pubmed-meshheading:12535521-Animals, pubmed-meshheading:12535521-Arabidopsis, pubmed-meshheading:12535521-Arabidopsis Proteins, pubmed-meshheading:12535521-Bacterial Proteins, pubmed-meshheading:12535521-Binding Sites, pubmed-meshheading:12535521-Biological Clocks, pubmed-meshheading:12535521-Cryptochromes, pubmed-meshheading:12535521-Crystallography, X-Ray, pubmed-meshheading:12535521-Cyanobacteria, pubmed-meshheading:12535521-Deoxyribodipyrimidine Photo-Lyase, pubmed-meshheading:12535521-Drosophila Proteins, pubmed-meshheading:12535521-Evolution, Molecular, pubmed-meshheading:12535521-Eye Proteins, pubmed-meshheading:12535521-Flavoproteins, pubmed-meshheading:12535521-Genes, Plant, pubmed-meshheading:12535521-Humans, pubmed-meshheading:12535521-Models, Molecular, pubmed-meshheading:12535521-Molecular Sequence Data, pubmed-meshheading:12535521-Oligonucleotide Array Sequence Analysis, pubmed-meshheading:12535521-Photoreceptor Cells, Invertebrate, pubmed-meshheading:12535521-Phylogeny, pubmed-meshheading:12535521-Receptors, G-Protein-Coupled, pubmed-meshheading:12535521-Sequence Alignment, pubmed-meshheading:12535521-Sequence Analysis, DNA, pubmed-meshheading:12535521-Substrate Specificity
pubmed:year
2003
pubmed:articleTitle
Identification of a new cryptochrome class. Structure, function, and evolution.
pubmed:affiliation
Department of Molecular Biology and Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't