Source:http://linkedlifedata.com/resource/pubmed/id/12468099
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1-2
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pubmed:dateCreated |
2002-12-6
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pubmed:abstractText |
The analysis of a non-redundant set of human proteins, for which both the crystallographic structures and the corresponding gene sequences are available, show that bases at third codon position are non-uniformly distributed along the coding sequences. Significant compositional differences are found by comparing the gene regions corresponding to the different secondary structures of the proteins. Inter-and intra-structure differences were most pronounced in the GC-richest genes. These results are not compatible with any proposed hypotheses based on a neutral process of formation/maintenance of the high GC(3) levels of the genes localized in the GC-richest isochores of the human genome.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Oct
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pubmed:issn |
0378-1119
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
30
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pubmed:volume |
300
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
179-87
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pubmed:dateRevised |
2010-11-18
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pubmed:meshHeading |
pubmed-meshheading:12468099-Amino Acids,
pubmed-meshheading:12468099-Base Composition,
pubmed-meshheading:12468099-Codon,
pubmed-meshheading:12468099-GC Rich Sequence,
pubmed-meshheading:12468099-Gene Frequency,
pubmed-meshheading:12468099-Genes,
pubmed-meshheading:12468099-Humans,
pubmed-meshheading:12468099-Hydrophobic and Hydrophilic Interactions,
pubmed-meshheading:12468099-Protein Structure, Secondary,
pubmed-meshheading:12468099-Proteins
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pubmed:year |
2002
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pubmed:articleTitle |
The base composition of the genes is correlated with the secondary structures of the encoded proteins.
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pubmed:affiliation |
Laboratorio di Evoluzione Molecolare, Stazione Zoologica A. Dohrn, Naples, Italy. donofrio@sunev.szn.it
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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