Source:http://linkedlifedata.com/resource/pubmed/id/12398192
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
4
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pubmed:dateCreated |
2002-10-25
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pubmed:abstractText |
We describe here a PCR-based "directional genome walking" protocol. The basic procedure for the amplification consists of two rounds of PCR. A primary PCR was performed, on the genomic DNA using a biotinylated primer specific to a known sequence in the genome along with four universal walker primers that were designed with partial degeneracy. The biotinylated primary PCR products were immobilized on streptavidin-linked paramagnetic beads. This step removed all nonspecific amplification products, and the purified template was used for the second PCR using a nested primer and the walker primer-2 to increase specificity. This technique is potentially useful for cloning promoter regions and has been successfully used to isolate 5'-flanking genomic regions of many cDNA clones previously isolated by us.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Oct
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pubmed:issn |
0736-6205
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
33
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
830-2, 834
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pubmed:meshHeading |
pubmed-meshheading:12398192-Base Sequence,
pubmed-meshheading:12398192-Chromosome Walking,
pubmed-meshheading:12398192-DNA, Plant,
pubmed-meshheading:12398192-DNA Primers,
pubmed-meshheading:12398192-Genome, Plant,
pubmed-meshheading:12398192-Nucleic Acid Amplification Techniques,
pubmed-meshheading:12398192-Polymerase Chain Reaction
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pubmed:year |
2002
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pubmed:articleTitle |
Directional genome walking using PCR.
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pubmed:affiliation |
International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
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pubmed:publicationType |
Technical Report
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