Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
8
pubmed:dateCreated
2002-7-17
pubmed:databankReference
pubmed:abstractText
An Escherichia coli strain, HKYM68, which showed resistance to broad-spectrum cephalosporins was isolated from a sputum specimen in Japan. The high-level resistance of the strain to ceftazidime, cefpirome, and moxalactam was carried by a self-transferable plasmid. The beta-lactamase gene responsible for the resistance was cloned and sequenced. The deduced amino acid sequence of this gene product, CMY-9, had a single amino acid substitution (E85D), the residue reported to be part of the recognition site for the R1 side chain of beta-lactams, compared with the amino acid sequence of CMY-8 and also had 78% identity with the amino acid sequence of CepH, a chromosomal cephalosporinase of Aeromonas hydrophila. A sul1-type class 1 integron containing an aacA1-orfG gene cassette was identified upstream of bla(CMY-9) and ended with a truncated 3' conserved segment. The following 2.1 kb was almost identical to the common region of integrons In6 and In7 and the integron of pSAL-1, except that orf513 encoding a putative transposase was identified instead of orf341 due to addition of a single nucleotide. bla(CMY-9) was closely located downstream of the end of the common region. These observations are indicative of the exogenous derivation of bla(CMY-9) from some environmental microorganisms such as aeromonads.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-10348751, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-10390237, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-10602756, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-10817689, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-10817695, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-10991873, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-11062187, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-11114922, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-11157909, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-11600376, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-1646375, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-1662753, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-2349283, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-2689349, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-271968, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-6351733, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-7574506, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-7783631, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-7846147, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8004055, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8067761, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8112596, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8378445, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8517725, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8537283, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8787910, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8793392, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8843306, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-8940421, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-9278503, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-9420027, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-9527797, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-9675457, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-9819201, http://linkedlifedata.com/resource/pubmed/commentcorrection/12121914-9868767
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
0066-4804
pubmed:author
pubmed:issnType
Print
pubmed:volume
46
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2427-34
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:12121914-Anti-Bacterial Agents, pubmed-meshheading:12121914-Base Sequence, pubmed-meshheading:12121914-Cephalosporinase, pubmed-meshheading:12121914-Cephalosporins, pubmed-meshheading:12121914-Cloning, Molecular, pubmed-meshheading:12121914-DNA, Bacterial, pubmed-meshheading:12121914-Escherichia coli, pubmed-meshheading:12121914-Escherichia coli Infections, pubmed-meshheading:12121914-Escherichia coli Proteins, pubmed-meshheading:12121914-Genes, Bacterial, pubmed-meshheading:12121914-Isoelectric Focusing, pubmed-meshheading:12121914-Kinetics, pubmed-meshheading:12121914-Microbial Sensitivity Tests, pubmed-meshheading:12121914-Molecular Sequence Data, pubmed-meshheading:12121914-Plasmids, pubmed-meshheading:12121914-Reverse Transcriptase Polymerase Chain Reaction, pubmed-meshheading:12121914-beta-Lactamases
pubmed:year
2002
pubmed:articleTitle
Characterization of a novel plasmid-mediated cephalosporinase (CMY-9) and its genetic environment in an Escherichia coli clinical isolate.
pubmed:affiliation
Department of Bacterial Pathogenesis and Infection Control, National Institute of Infectious Diseases, 4-7-1 Gauken, Musashi-murayama, Tokyo 208-0011, Japan. yohei@nih.go.jp
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't