Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Pt 2
pubmed:dateCreated
2002-8-21
pubmed:databankReference
pubmed:abstractText
A partial syndecan-2 sequence (147 bp) was obtained from chicken embryonic fibroblast poly(A)+ RNA by reverse transcription-PCR. This partial sequence was used to produce a 5'-end-labelled probe. A chicken liver cDNA library was screened with this probe, and overlapping clones were obtained encompassing the entire cDNA of 3 kb. The open reading frame encodes a protein of 201 amino acids. The cytoplasmic domain is identical with that of mammalian syndecan-2, and highly similar to those of Xenopus laevis and zebrafish syndecan-2. The transmembrane domain is identical with that of mammalian and zebrafish syndecan-2, and highly similar to that of Xenopus laevis syndecan-2. The ectodomain is 45-62% identical with that of zebrafish, Xenopus laevis and mammalian syndecan-2. Two coding single nucleotide polymorphisms were observed. In vitro transcription and translation yielded a product of 30 kDa. Western blotting of chicken embryonic fibroblast cell lysates with species-specific monoclonal antibody mAb 8.1 showed that chicken syndecan-2 is substituted with heparan sulphate, and that the major form of chicken syndecan-2 isolated from chicken fibroblasts is consistent with the formation of SDS-resistant dimers, which is common for syndecans. A 5'-end-labelled probe hybridized to two mRNA species in chicken embryonic fibroblasts, while Northern analysis with poly(A)+ RNAs from different tissues of chicken embryos showed wide and distinct distributions of chicken syndecan-2 during embryonic development. This pattern was different from that reported for syndecan-4, but consistent with the roles of syndecan-2 in neural maturation and in mesenchymal-matrix interactions.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10222136, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10373479, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10391209, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10460248, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10504291, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10639336, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10640397, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10704377, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10772816, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10782114, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10872465, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-10888884, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11018053, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11041486, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11084653, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11160142, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11304570, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11352265, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11373281, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11427509, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11461706, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11580899, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11585825, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-11782319, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-1629245, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-1740437, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-1955461, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-7729580, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-7812048, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-8187643, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-8276871, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9115237, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9148893, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9234718, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9244383, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9391086, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9553124, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9582338, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9660868, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9695837, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9748216, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9792716, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9872978, http://linkedlifedata.com/resource/pubmed/commentcorrection/12038962-9971750
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
0264-6021
pubmed:author
pubmed:issnType
Print
pubmed:day
1
pubmed:volume
366
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
481-90
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
More...