Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
11
pubmed:dateCreated
2002-5-28
pubmed:abstractText
TIP47 (tail-interacting protein of 47 kDa) binds to the cytoplasmic domains of the cation-dependent and cation-independent mannose 6-phosphate receptors (MPRs) and is required for their transport from endosomes to the trans-Golgi network in vitro and in living cells. TIP47 recognizes distinct determinants in the cytoplasmic domains of these two receptors, and its ability to bind to the cation-independent MPR is enhanced by the concomitant binding of the Rab9 GTPase. We show here that TIP47 residues 161-169 are essential, but likely not sufficient, for Rab9 binding. Mutation of these residues led to a significant decrease in Rab9 binding, but did not alter the global folding of the protein. The most impaired mutant was indistinguishable from wild-type TIP47 in its circular dichroism spectrum, and mutant proteins that showed decreased Rab9 binding retained full capacity to bind to MPR cytoplasmic domains. Closely related sequences in a related protein, adipophilin, did not confer Rab9 binding capacity to that protein. Partial proteolysis of TIP47 and TIP47 mutant proteins revealed subtle conformational differences, suggesting that residues 161-169 reside in a portion of TIP47 that is important for its conformation. These experiments reveal distinct binding domains for the Rab9 GTPase and MPR cytoplasmic domains in the cargo selection protein TIP47.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-10829017, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-10908666, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-11313361, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-11359012, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-11827983, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-1323236, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-2557062, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-7909812, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-8440258, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-8463223, http://linkedlifedata.com/resource/pubmed/commentcorrection/12032303-9590177
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/DNA-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Intracellular Signaling Peptides..., http://linkedlifedata.com/resource/pubmed/chemical/Membrane Proteins, http://linkedlifedata.com/resource/pubmed/chemical/PLIN3 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Peptide Fragments, http://linkedlifedata.com/resource/pubmed/chemical/Peptides, http://linkedlifedata.com/resource/pubmed/chemical/Pregnancy Proteins, http://linkedlifedata.com/resource/pubmed/chemical/RAB9A protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Receptor, IGF Type 2, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Fusion Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Vesicular Transport Proteins, http://linkedlifedata.com/resource/pubmed/chemical/perilipin 2, http://linkedlifedata.com/resource/pubmed/chemical/rab GTP-Binding Proteins
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
28
pubmed:volume
99
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
7450-4
pubmed:dateRevised
2011-11-17
pubmed:meshHeading
pubmed-meshheading:12032303-Amino Acid Sequence, pubmed-meshheading:12032303-Binding Sites, pubmed-meshheading:12032303-Circular Dichroism, pubmed-meshheading:12032303-DNA-Binding Proteins, pubmed-meshheading:12032303-Endosomes, pubmed-meshheading:12032303-Escherichia coli, pubmed-meshheading:12032303-Intracellular Signaling Peptides and Proteins, pubmed-meshheading:12032303-Kinetics, pubmed-meshheading:12032303-Membrane Proteins, pubmed-meshheading:12032303-Mutagenesis, Site-Directed, pubmed-meshheading:12032303-Peptide Fragments, pubmed-meshheading:12032303-Peptides, pubmed-meshheading:12032303-Pregnancy Proteins, pubmed-meshheading:12032303-Protein Folding, pubmed-meshheading:12032303-Protein Transport, pubmed-meshheading:12032303-Receptor, IGF Type 2, pubmed-meshheading:12032303-Recombinant Fusion Proteins, pubmed-meshheading:12032303-Recombinant Proteins, pubmed-meshheading:12032303-Vesicular Transport Proteins, pubmed-meshheading:12032303-rab GTP-Binding Proteins, pubmed-meshheading:12032303-trans-Golgi Network
pubmed:year
2002
pubmed:articleTitle
Identification of residues in TIP47 essential for Rab9 binding.
pubmed:affiliation
Department of Biochemistry, Stanford University School of Medicine, 279 Campus Drive, Stanford, CA 94305-5307, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S.