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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Pt 3
pubmed:dateCreated
2002-1-22
pubmed:abstractText
In the present study, we demonstrate that a human homologue of Ufd2p (a yeast protein that catalyses the formation of long polyubiquitin chains, and is implicated in responses to environmental stress), UFD2 (ubiquitin fusion degradation protein-2), is cleaved during apoptosis induced by multiple stimuli, including UVB irradiation, Fas ligation, staurosporine treatment and cytotoxic lymphocyte granule-induced death. Caspase 6 and granzyme B efficiently cleave UFD2 [k(cat)/K(m)=(4-5) x 10(4) M(-1) x s(-1)] at Asp(123), whereas caspases 3 and 7 cleave UFD2 approx. 10-fold less efficiently immediately upstream at Asp(109). Thus UFD2 is added to the growing list of proteins with closely spaced caspase and granzyme B cleavage sites, suggesting the presence of a previously unrecognized, conserved motif. Both cleavage sites are contained and conserved within a novel 300-amino-acid N-terminal domain present in apparent UFD2 orthologues in mice and zebrafish, but absent in all UFD2 family members in lower eukaryotes. Full-length recombinant UFD2 exhibited ubiquitin-protein ligase ('E3')-like ubiquitination activity in vitro, but this activity was abolished in recombinant UFD2 truncated at the granzyme B/caspase 6 cleavage site. Cleavage of UFD2 by caspases or granzyme B within this putative regulatory N-terminal domain might have important functional consequences within the apoptotic cascade.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-10089879, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-10196102, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-10499920, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-10521451, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-10578171, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-10704423, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-11081635, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-11085742, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-11085743, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-11102778, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-11114298, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-11435423, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-7500007, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-7511686, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-7566124, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-7615550, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-7845246, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-8706881, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9039261, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9092497, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9218414, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9490001, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9586635, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9721090, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9727034, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9727492, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9765224, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9765264, http://linkedlifedata.com/resource/pubmed/commentcorrection/11802788-9874570
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/CASP6 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Caspase 6, http://linkedlifedata.com/resource/pubmed/chemical/Caspases, http://linkedlifedata.com/resource/pubmed/chemical/Enzyme Inhibitors, http://linkedlifedata.com/resource/pubmed/chemical/Fungal Proteins, http://linkedlifedata.com/resource/pubmed/chemical/GZMB protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Granzymes, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Saccharomyces cerevisiae Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Serine Endopeptidases, http://linkedlifedata.com/resource/pubmed/chemical/Staurosporine, http://linkedlifedata.com/resource/pubmed/chemical/UFD2 protein, S cerevisiae, http://linkedlifedata.com/resource/pubmed/chemical/Ubiquitin, http://linkedlifedata.com/resource/pubmed/chemical/Ubiquitin-Conjugating Enzymes
pubmed:status
MEDLINE
pubmed:month
Feb
pubmed:issn
0264-6021
pubmed:author
pubmed:issnType
Print
pubmed:day
1
pubmed:volume
361
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
587-95
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:11802788-Humans, pubmed-meshheading:11802788-Ultraviolet Rays, pubmed-meshheading:11802788-Fungal Proteins, pubmed-meshheading:11802788-Enzyme Inhibitors, pubmed-meshheading:11802788-Kinetics, pubmed-meshheading:11802788-Saccharomyces cerevisiae Proteins, pubmed-meshheading:11802788-Precipitin Tests, pubmed-meshheading:11802788-Amino Acid Sequence, pubmed-meshheading:11802788-Protein Binding, pubmed-meshheading:11802788-Tissue Distribution, pubmed-meshheading:11802788-HeLa Cells, pubmed-meshheading:11802788-Binding Sites, pubmed-meshheading:11802788-Serine Endopeptidases, pubmed-meshheading:11802788-Molecular Sequence Data, pubmed-meshheading:11802788-Protein Structure, Tertiary, pubmed-meshheading:11802788-Cloning, Molecular, pubmed-meshheading:11802788-Sequence Homology, Amino Acid, pubmed-meshheading:11802788-Amino Acid Motifs, pubmed-meshheading:11802788-Apoptosis, pubmed-meshheading:11802788-Recombinant Proteins
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