Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2002-1-15
pubmed:databankReference
pubmed:abstractText
Studies in mouse and chick have shown that the 5' HoxD genes play major roles in the development of the limbs and genitalia. In humans, mutations in HOXD13 cause the dominantly inherited limb malformation synpolydactyly (SPD). Haploinsufficiency for the 5' HOXD genes has recently been proposed to underlie the monodactyly and penoscrotal hypoplasia in two children with chromosomal deletions encompassing the entire HOXD cluster. Similar deletions, however, have previously been associated with split-hand/foot malformation (SHFM), including monodactyly. Here we report a father and daughter with SPD who carry a 117-kb microdeletion at the 5' end of the HOXD cluster. By sequencing directly across the deletion breakpoint, we show that this microdeletion removes only HOXD9-HOXD13 and EVX2. We also report a girl with bilateral split foot and a chromosomal deletion that includes the entire HOXD cluster and extends approximately 5 Mb centromeric to it. Our findings indicate that haploinsufficiency for the 5' HOXD genes causes not SHFM but SPD and point to the presence of a novel locus for SHFM in the interval between EVX2 and D2S294. They also suggest that there is a regulatory region, upstream of the HOXD cluster, that is responsible for activating the cluster as a whole.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-10075849, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-10199961, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-10319820, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-10364522, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-10364539, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-10440834, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-10649798, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-11060466, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-11181995, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-11206481, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-11214970, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-11237011, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-11543619, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-2260571, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-3789004, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-7717414, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-7896287, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-7907794, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-7913880, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8100165, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8595404, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8600387, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8614804, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8674109, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8707297, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8733122, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8817328, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-8900279, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-9187081, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-9188674, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-9207113, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-9533876, http://linkedlifedata.com/resource/pubmed/commentcorrection/11778160-9758628
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Feb
pubmed:issn
0002-9297
pubmed:author
pubmed:issnType
Print
pubmed:volume
70
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
547-55
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:11778160-Base Sequence, pubmed-meshheading:11778160-Chromosome Breakage, pubmed-meshheading:11778160-DNA Mutational Analysis, pubmed-meshheading:11778160-DNA-Binding Proteins, pubmed-meshheading:11778160-Female, pubmed-meshheading:11778160-Foot Deformities, Congenital, pubmed-meshheading:11778160-Hand Deformities, Congenital, pubmed-meshheading:11778160-Haplotypes, pubmed-meshheading:11778160-Homeodomain Proteins, pubmed-meshheading:11778160-Humans, pubmed-meshheading:11778160-Limb Deformities, Congenital, pubmed-meshheading:11778160-Male, pubmed-meshheading:11778160-Molecular Sequence Data, pubmed-meshheading:11778160-Multigene Family, pubmed-meshheading:11778160-Neoplasm Proteins, pubmed-meshheading:11778160-Pedigree, pubmed-meshheading:11778160-Phenotype, pubmed-meshheading:11778160-Sequence Deletion, pubmed-meshheading:11778160-Transcription Factors
pubmed:year
2002
pubmed:articleTitle
A 117-kb microdeletion removing HOXD9-HOXD13 and EVX2 causes synpolydactyly.
pubmed:affiliation
Molecular Medicine Unit, Institute of Child Health, London, United Kingdom. fgoodman@hgmp.mrc.ac.uk
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't