Source:http://linkedlifedata.com/resource/pubmed/id/11565853
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
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pubmed:dateCreated |
2001-9-21
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pubmed:abstractText |
The three-dimensional structure of thermostable catechol 2,3-dioxygenase(TC230) from Bacillus Stearothermophilus has been modeled basing on the known x-ray structure of catechol 2,3-dioxygenase(metapyrocatechase) from Pseudomonas putida mt-2, using computer graphics energy minimization techniques. The rationality of the resulting model was validated by Ramachandran plot and Profile-3D. The structure-functionally important residues, such as M++ binding residues and the substrate binding residues, were identified from the model. These residues are candidates for further site-directed mutagenesis experiments. The reason that the thermostability of TC230 is greater than metapyrocatechase(MPC) has been found, which may be due to the specific structure of the TC230 in the C-end mainly.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Aug
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pubmed:issn |
0739-1102
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
19
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
75-83
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pubmed:dateRevised |
2009-11-19
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pubmed:meshHeading |
pubmed-meshheading:11565853-Amino Acid Sequence,
pubmed-meshheading:11565853-Catalytic Domain,
pubmed-meshheading:11565853-Catechol 2,3-Dioxygenase,
pubmed-meshheading:11565853-Computer Simulation,
pubmed-meshheading:11565853-Dioxygenases,
pubmed-meshheading:11565853-Enzyme Stability,
pubmed-meshheading:11565853-Geobacillus stearothermophilus,
pubmed-meshheading:11565853-Models, Molecular,
pubmed-meshheading:11565853-Molecular Sequence Data,
pubmed-meshheading:11565853-Oxygenases,
pubmed-meshheading:11565853-Protein Conformation,
pubmed-meshheading:11565853-Protein Structure, Secondary,
pubmed-meshheading:11565853-Sequence Homology, Amino Acid,
pubmed-meshheading:11565853-Temperature,
pubmed-meshheading:11565853-Thermodynamics
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pubmed:year |
2001
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pubmed:articleTitle |
Modeling and analysis of the structure of the thermostable catechol 2,3-dioxygenase from Bacillus Stearothermophilus.
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pubmed:affiliation |
Center of Analysis and Measurement, School of Life Sciences, Fudan University, Shanghai, China.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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