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pubmed-article:11372197pubmed:abstractTextCytochrome c554 (cyt c554) is a tetra-heme cytochrome involved in the oxidation of NH3 by Nitrosomonas europaea. The X-ray crystal structures of both the oxidized and dithionite-reduced states of cyt c554 in a new, rhombohedral crystal form have been solved by molecular replacement, at 1.6 A and 1.8 A resolution, respectively. Upon reduction, the conformation of the polypeptide chain changes between residues 175 and 179, which are adjacent to hemes III and IV. Cyt c554 displays conserved heme-packing motifs that are present in other heme-containing proteins. Comparisons to hydroxylamine oxidoreductase, the electron donor to cyt c554, and cytochrome c nitrite reductase, an enzyme involved in nitrite ammonification, reveal substantial structural similarity in the polypeptide chain surrounding the heme core environment. The structural determinants of these heme-packing motifs extend to the buried water molecules that hydrogen bond to the histidine ligands to the heme iron. In the original structure determination of a tetragonal crystal form, a cis peptide bond between His129 and Phe130 was identified that appeared to be stabilized by crystal contacts. In the rhombohedral crystal form used in the present high-resolution structure determination, this peptide bond adopts the trans conformation, but with disallowed angles of phi and psi.lld:pubmed
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pubmed-article:11372197pubmed:pagination390-7lld:pubmed
pubmed-article:11372197pubmed:dateRevised2007-11-14lld:pubmed
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pubmed-article:11372197pubmed:articleTitleHigh-resolution structures of the oxidized and reduced states of cytochrome c554 from Nitrosomonas europaea.lld:pubmed
pubmed-article:11372197pubmed:affiliationDivision of Chemistry and Chemical Engineering and Howard Hughes Medical Institute, MC 147-75 CH, California Institute of Technology, Pasadena, CA 91125, USA.lld:pubmed
pubmed-article:11372197pubmed:publicationTypeJournal Articlelld:pubmed
pubmed-article:11372197pubmed:publicationTypeResearch Support, U.S. Gov't, P.H.S.lld:pubmed
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