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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
2001-5-23
pubmed:abstractText
A spectrally silent transformation in the photolysis of octopus rhodopsin was detected by the time-resolved transient grating method. Our results showed that at least two photointermediates, which share the same chromophore absorption spectrum, exist after the final absorption changes. Previously, mesorhodopsin was thought to decay to the final photoproduct, acid metarhodopsin with a lifetime of 38 micros at 15 degrees C, but the present results show that there is at least one intermediate species (called transient acid metarhodopsin) with a lifetime of 180 micros at 15 degrees C, before forming acid metarhodopsin. This indicates that the parts of the protein distant from the chromophore are still changing even after the changes in microenvironment around the chromophore are over. From the signal intensity detected by the transient grating method, the volume change of the spectrally silent transformation was found to be DeltaV = 13 ml/mol. The activation energy of the spectrally silent transformation is much lower than those of other transformations of octopus rhodopsin. Since stable acid metarhodopsin has not been shown to activate the G protein, this transient acid metarhodopsin may be responsible for G protein activation.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-10339563, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-1420186, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-1634520, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-1775525, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-19431715, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-2423011, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-2742842, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-2780545, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-34434, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-3663635, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-7737995, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-7756529, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-8099498, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-8425608, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-8977115, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-9020785, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-9129835, http://linkedlifedata.com/resource/pubmed/commentcorrection/11371464-9781691
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
0006-3495
pubmed:author
pubmed:issnType
Print
pubmed:volume
80
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2922-7
pubmed:dateRevised
2010-9-14
pubmed:meshHeading
pubmed:year
2001
pubmed:articleTitle
A spectrally silent transformation in the photolysis of octopus rhodopsin: a protein conformational change without any accompanying change of the chromophore's absorption.
pubmed:affiliation
Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
pubmed:publicationType
Journal Article