Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
4
pubmed:dateCreated
2001-3-14
pubmed:abstractText
The rainbow trout caspase 6 gene has been cloned and sequenced. The open reading frame consisted of 906bp, which translated into a protein of 302 amino acids, containing the caspase active site pentapeptide (QACRG) and the caspase family signature (HADADCFVCVFLSHG). Amino acids involved in catalysis and those known to form the P1 carbohydrate binding pocket were conserved. Phylogenetic tree analysis showed a tight grouping with other known caspase 6 genes. Conserved aspartic acid residues at positions 33, 191 and 202 suggested that this molecule is produced as a proenzyme that is subsequently cleaved to release active subunits, with the region between Asp-191 and Ala-203 acting as a linker that is cleaved out. RT-PCR analysis revealed that the trout caspase 6 gene was expressed in brain, blood, gill, liver, head kidney and spleen. Addition of LPS or cortisol to head kidney leucocyte cultures had no effect upon caspase 6 expression. However, addition of LPS after preincubation with cortisol increased expression relative to control cultures. Incubation with RU486 abrogated this effect, confirming it was mediated via glucocorticoid receptors. Lastly, a confinement stress in vivo increased caspase 6 expression. The data are discussed with respect to the immunoregulatory role of apoptosis in fish immune responses.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0145-305X
pubmed:author
pubmed:issnType
Print
pubmed:volume
25
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
303-12
pubmed:dateRevised
2008-11-21
pubmed:meshHeading
pubmed-meshheading:11246070-Amino Acid Sequence, pubmed-meshheading:11246070-Animals, pubmed-meshheading:11246070-Apoptosis, pubmed-meshheading:11246070-Base Sequence, pubmed-meshheading:11246070-Binding Sites, pubmed-meshheading:11246070-Caspase 6, pubmed-meshheading:11246070-Caspases, pubmed-meshheading:11246070-Chickens, pubmed-meshheading:11246070-Consensus Sequence, pubmed-meshheading:11246070-Enzyme Induction, pubmed-meshheading:11246070-Evolution, Molecular, pubmed-meshheading:11246070-Genes, pubmed-meshheading:11246070-Hormone Antagonists, pubmed-meshheading:11246070-Humans, pubmed-meshheading:11246070-Hydrocortisone, pubmed-meshheading:11246070-Leukocytes, pubmed-meshheading:11246070-Lipopolysaccharides, pubmed-meshheading:11246070-Mice, pubmed-meshheading:11246070-Mifepristone, pubmed-meshheading:11246070-Molecular Sequence Data, pubmed-meshheading:11246070-Oncorhynchus mykiss, pubmed-meshheading:11246070-Organ Specificity, pubmed-meshheading:11246070-Phylogeny, pubmed-meshheading:11246070-RNA, Messenger, pubmed-meshheading:11246070-Rats, pubmed-meshheading:11246070-Receptors, Glucocorticoid, pubmed-meshheading:11246070-Reverse Transcriptase Polymerase Chain Reaction, pubmed-meshheading:11246070-Sequence Alignment, pubmed-meshheading:11246070-Sequence Homology, Amino Acid, pubmed-meshheading:11246070-Stress, Physiological
pubmed:year
2001
pubmed:articleTitle
Cloning and sequencing of caspase 6 in rainbow trout, Oncorhynchus mykiss, and analysis of its expression under conditions known to induce apoptosis.
pubmed:affiliation
Department of Zoology, University of Aberdeen, Tillydrone Avenue, Aberdeen AB24 2TZ, UK.
pubmed:publicationType
Journal Article, Comparative Study, Research Support, Non-U.S. Gov't