Source:http://linkedlifedata.com/resource/pubmed/id/11238070
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
2
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pubmed:dateCreated |
2001-3-12
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pubmed:abstractText |
Traditional sequence distances require an alignment and therefore are not directly applicable to the problem of whole genome phylogeny where events such as rearrangements make full length alignments impossible. We present a sequence distance that works on unaligned sequences using the information theoretical concept of Kolmogorov complexity and a program to estimate this distance.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Feb
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pubmed:issn |
1367-4803
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
17
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
149-54
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:11238070-Animals,
pubmed-meshheading:11238070-DNA, Mitochondrial,
pubmed-meshheading:11238070-Humans,
pubmed-meshheading:11238070-Mathematical Computing,
pubmed-meshheading:11238070-Phylogeny,
pubmed-meshheading:11238070-Rodentia,
pubmed-meshheading:11238070-Sequence Alignment,
pubmed-meshheading:11238070-Sequence Analysis, DNA,
pubmed-meshheading:11238070-Software
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pubmed:year |
2001
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pubmed:articleTitle |
An information-based sequence distance and its application to whole mitochondrial genome phylogeny.
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pubmed:affiliation |
Bioinformatics Laboratory, Computer Science Department, University of Waterloo, N2L 3G1, Canada. mli@wh.math.uwaterloo.ca
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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