Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2001-2-22
pubmed:databankReference
pubmed:abstractText
The human CLC-5 chloride channel is expressed mainly in the kidney and its mutations cause Dent's disease (a familial renal tubular syndrome with hypercalciuria, tubular proteinuria, rickets, nephrocalcinosis, and eventual renal failure). To gain insight into the regulatory mechanism of CLC-5 expression, a genomic clone that contains the 5'-flanking region of the human CLC-5 gene was isolated and characterized. Two types of 5'-ends of cDNA were isolated by 5'-rapid amplification of cDNA ends, and one of them, approximately 2.1 kbp upstream of ATG-containing exon II, was first identified in human. The major promoter activity was detected in the 5'-flanking region of this newly identified exon Ia. The sequence of the proximal 5'-flanking region contained an activator protein (AP)-1-like site and cAMP-responsive element, but it lacked a TATA box, a GC-rich element, and an SP-1 site. Deletion analysis of the 5'-flanking region showed that the fragments containing the AP-1-like element (TGACTCC) positioned at -38 exhibited high promoter activities in CLC-5 expressing LLC-PK1 cells, but that further deletions not containing this AP-1-like element resulted in a great loss of luciferase activities. Gel-retardation analysis demonstrated the existence of a specific protein binding to this AP-1-like element in LLC-PK1 cells, which seemed to differ from an authentic AP-1. This study clarified the key element of the human CLCN5 promoter, and the mutation in this region could be the cause of Dent's disease.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/8-((4-chlorophenyl)thio)cyclic-3',5'..., http://linkedlifedata.com/resource/pubmed/chemical/CLC-5 chloride channel, http://linkedlifedata.com/resource/pubmed/chemical/Chloride Channels, http://linkedlifedata.com/resource/pubmed/chemical/Cyclic AMP, http://linkedlifedata.com/resource/pubmed/chemical/DNA, http://linkedlifedata.com/resource/pubmed/chemical/DNA, Complementary, http://linkedlifedata.com/resource/pubmed/chemical/Forskolin, http://linkedlifedata.com/resource/pubmed/chemical/Luciferases, http://linkedlifedata.com/resource/pubmed/chemical/Parathyroid Hormone, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Fusion Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Tetradecanoylphorbol Acetate, http://linkedlifedata.com/resource/pubmed/chemical/Thionucleotides, http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factor AP-1
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
0378-1119
pubmed:author
pubmed:issnType
Print
pubmed:day
31
pubmed:volume
261
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
355-64
pubmed:dateRevised
2008-11-21
pubmed:meshHeading
pubmed-meshheading:11167024-Animals, pubmed-meshheading:11167024-Base Sequence, pubmed-meshheading:11167024-Binding Sites, pubmed-meshheading:11167024-CHO Cells, pubmed-meshheading:11167024-Cell Line, pubmed-meshheading:11167024-Chloride Channels, pubmed-meshheading:11167024-Cloning, Molecular, pubmed-meshheading:11167024-Cricetinae, pubmed-meshheading:11167024-Cyclic AMP, pubmed-meshheading:11167024-DNA, pubmed-meshheading:11167024-DNA, Complementary, pubmed-meshheading:11167024-Dose-Response Relationship, Drug, pubmed-meshheading:11167024-Forskolin, pubmed-meshheading:11167024-Gene Expression Regulation, pubmed-meshheading:11167024-Humans, pubmed-meshheading:11167024-Luciferases, pubmed-meshheading:11167024-Molecular Sequence Data, pubmed-meshheading:11167024-Mutation, pubmed-meshheading:11167024-Parathyroid Hormone, pubmed-meshheading:11167024-Promoter Regions, Genetic, pubmed-meshheading:11167024-Protein Binding, pubmed-meshheading:11167024-RNA Splicing, pubmed-meshheading:11167024-Recombinant Fusion Proteins, pubmed-meshheading:11167024-Sequence Analysis, DNA, pubmed-meshheading:11167024-Sequence Deletion, pubmed-meshheading:11167024-Sequence Homology, Nucleic Acid, pubmed-meshheading:11167024-Tetradecanoylphorbol Acetate, pubmed-meshheading:11167024-Thionucleotides, pubmed-meshheading:11167024-Transcription, Genetic, pubmed-meshheading:11167024-Transcription Factor AP-1
pubmed:year
2000
pubmed:articleTitle
Isolation and characterization of the human CLC-5 chloride channel gene promoter.
pubmed:affiliation
Second Department of Internal Medicine, Tokyo Medical and Dental University, School of Medicine, 1-5-45 Yushima Bunkyo-ku, 113-8519, Tokyo, Japan.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't