11125085

Source:http://linkedlifedata.com/resource/pubmed/id/11125085

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Predicate	Object
rdf:type	pubmed:Citation
lifeskim:mentions	umls-concept:C0029073, umls-concept:C0035701, umls-concept:C0242356, umls-concept:C1707513
pubmed:issue	1
pubmed:dateCreated	2001-1-4
pubmed:abstractText	The Ribosomal RNA Operon Copy Number Database (rrndb) is an Internet-accessible database containing annotated information on rRNA operon copy number among prokaryotes. Gene redundancy is uncommon in prokaryotic genomes, yet the rRNA genes can vary from one to as many as 15 copies. Despite the widespread use of 16S rRNA gene sequences for identification of prokaryotes, information on the number and sequence of individual rRNA genes in a genome is not readily accessible. In an attempt to understand the evolutionary implications of rRNA operon redundancy, we have created a phylogenetically arranged report on rRNA gene copy number for a diverse collection of prokaryotic microorganisms. Each entry (organism) in the rrndb contains detailed information linked directly to external websites including the Ribosomal Database Project, GenBank, PubMed and several culture collections. Data contained in the rrndb will be valuable to researchers investigating microbial ecology and evolution using 16S rRNA gene sequences. The rrndb web site is directly accessible on the WWW at http://rrndb.cme. msu.edu.
pubmed:commentsCorrections	http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-10592216, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-10742207, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-10835003, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-10919794, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-1396599, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-1701878, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-2317046, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-7683183, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-8742634, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-9150223, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-9361437, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-9403685, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-9451814, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-9602286, http://linkedlifedata.com/resource/pubmed/commentcorrection/11125085-9618454
pubmed:language	eng
pubmed:journal	http://linkedlifedata.com/resource/pubmed/journal/0411011
pubmed:citationSubset	IM
pubmed:status	MEDLINE
pubmed:month	Jan
pubmed:issn	1362-4962
pubmed:author	pubmed-author:ColeJ RJR, pubmed-author:KlappenbachJ AJA, pubmed-author:SaxmanP RPR, pubmed-author:SchmidtT MTM
pubmed:issnType	Electronic
pubmed:day	1
pubmed:volume	29
pubmed:owner	NLM
pubmed:authorsComplete	Y
pubmed:pagination	181-4
pubmed:dateRevised	2010-9-14
pubmed:meshHeading	pubmed-meshheading:11125085-Databases, Factual, pubmed-meshheading:11125085-Gene Dosage, pubmed-meshheading:11125085-Genes, rRNA, pubmed-meshheading:11125085-Internet, pubmed-meshheading:11125085-Phylogeny, pubmed-meshheading:11125085-rRNA Operon
pubmed:year	2001
pubmed:articleTitle	rrndb: the Ribosomal RNA Operon Copy Number Database.
pubmed:affiliation	Department of Microbiology and Molecular Genetics and Center for Microbial Ecology, Michigan State University, 203 Giltner Hall, East Lansing, MI 48824-1101, USA.
pubmed:publicationType	Journal Article, Research Support, U.S. Gov't, Non-P.H.S., Research Support, Non-U.S. Gov't