Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
2000-11-29
pubmed:abstractText
We have identified many dark-inducible (din) genes that are expressed in Arabidopsis leaves kept in the dark. In the present study we addressed the question of how plant cells sense the depletion of sugars, and how sugar starvation triggers din gene expression in suspension-cultured cells of Arabidopsis. Depletion of sucrose in the medium triggered marked accumulation of din transcripts. Suppression of din gene expression by 2-deoxy-Glc, and a non-suppressive effect exerted by 3-O-methyl-Glc, suggested that sugar-repressible expression of din genes is mediated through the phosphorylation of hexose by hexokinase, as exemplified in the repression of photosynthetic genes by sugars. We have further shown that the signaling triggered by sugar starvation involves protein phosphorylation and dephosphorylation events, and have provided the first evidence that multiple pathways of protein dephosphorylation exist in sugar starvation-induced gene expression. An inhibitor of serine/threonine protein kinase, K-252a, inhibited din gene expression in sugar-depleted cells. Okadaic acid, which may preferentially inhibit type 2A protein phosphatases over type 1, enhanced the transcript levels of all din genes, except din6 and din10, under sugar starvation. Conversely, a more potent inhibitor of type 1 and 2A protein phosphatases, calyculin A, increased transcripts from din2 and din9, but decreased those from other din genes, in sugar-depleted cells. On the other hand, calyculin A, but not okadaic acid, completely inhibited the gene expression of chlorophyll a/b-binding protein under sugar starvation. These results indicate that multiple signaling pathways, mediated by different types of protein phosphatases, regulate gene expression during sugar starvation.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-10427773, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-10557216, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-10681595, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-10938849, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-10938850, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-16668022, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-16668928, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-1939156, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-2158158, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-3005285, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-7632917, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-7827498, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-7999117, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-8253076, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-8518555, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-8624406, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-8837509, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-8900187, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-9014361, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-9559559, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-9618445, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-9678569, http://linkedlifedata.com/resource/pubmed/commentcorrection/11080291-9684366
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Carbohydrates, http://linkedlifedata.com/resource/pubmed/chemical/Cycloheximide, http://linkedlifedata.com/resource/pubmed/chemical/Cytochrome c Group, http://linkedlifedata.com/resource/pubmed/chemical/Enzyme Inhibitors, http://linkedlifedata.com/resource/pubmed/chemical/Light-Harvesting Protein Complexes, http://linkedlifedata.com/resource/pubmed/chemical/Okadaic Acid, http://linkedlifedata.com/resource/pubmed/chemical/Oxazoles, http://linkedlifedata.com/resource/pubmed/chemical/Oxidoreductases, http://linkedlifedata.com/resource/pubmed/chemical/Phosphoprotein Phosphatases, http://linkedlifedata.com/resource/pubmed/chemical/Photosynthetic Reaction Center..., http://linkedlifedata.com/resource/pubmed/chemical/Plant Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Protein Kinase Inhibitors, http://linkedlifedata.com/resource/pubmed/chemical/Protein Synthesis Inhibitors, http://linkedlifedata.com/resource/pubmed/chemical/calyculin A, http://linkedlifedata.com/resource/pubmed/chemical/din1 protein, Raphanus sativus, http://linkedlifedata.com/resource/pubmed/chemical/flavocytochrome c sulfide...
pubmed:status
MEDLINE
pubmed:month
Nov
pubmed:issn
0032-0889
pubmed:author
pubmed:issnType
Print
pubmed:volume
124
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1139-48
pubmed:dateRevised
2010-9-14
pubmed:meshHeading
pubmed-meshheading:11080291-Arabidopsis, pubmed-meshheading:11080291-Blotting, Northern, pubmed-meshheading:11080291-Carbohydrates, pubmed-meshheading:11080291-Cells, Cultured, pubmed-meshheading:11080291-Cycloheximide, pubmed-meshheading:11080291-Cytochrome c Group, pubmed-meshheading:11080291-Darkness, pubmed-meshheading:11080291-Enzyme Inhibitors, pubmed-meshheading:11080291-Gene Expression Regulation, Plant, pubmed-meshheading:11080291-Genes, Plant, pubmed-meshheading:11080291-Light-Harvesting Protein Complexes, pubmed-meshheading:11080291-Okadaic Acid, pubmed-meshheading:11080291-Oxazoles, pubmed-meshheading:11080291-Oxidoreductases, pubmed-meshheading:11080291-Phosphoprotein Phosphatases, pubmed-meshheading:11080291-Phosphorylation, pubmed-meshheading:11080291-Photosynthetic Reaction Center Complex Proteins, pubmed-meshheading:11080291-Plant Proteins, pubmed-meshheading:11080291-Protein Kinase Inhibitors, pubmed-meshheading:11080291-Protein Synthesis Inhibitors, pubmed-meshheading:11080291-Signal Transduction
pubmed:year
2000
pubmed:articleTitle
Multiple signaling pathways in gene expression during sugar starvation. Pharmacological analysis of din gene expression in suspension-cultured cells of Arabidopsis.
pubmed:affiliation
Department of Biological Sciences, Graduate School of Science, University of Tokyo, Bunkyo-ku, Hongo, Tokyo 113-0033, Japan. fujiki@biol.s.u-tokyo.ac.jp
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't