Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
10
pubmed:dateCreated
2001-5-25
pubmed:abstractText
The ileal lipid-binding protein (ILBP) is the only physiologically relevant bile acid-binding protein in the cytosol of ileocytes. To identify the bile acid-binding site(s) of ILBP, recombinant rabbit ILBP photolabeled with 3-azi- and 7-azi-derivatives of cholyltaurine was analyzed by a combination of enzymatic fragmentation, gel electrophoresis, and matrix-assisted laser desorption ionization (MALDI)-mass spectrometry. The attachment site of the 3-position of cholyltaurine was localized to the amino acid triplet His(100)-Thr(101)-Ser(102) using the photoreactive 3,3-azo-derivative of cholyltaurine. With the corresponding 7,7-azo-derivative, the attachment point of the 7-position could be localized to the C-terminal part (position 112-128) as well as to the N-terminal part suggesting more than one binding site for bile acids. By chemical modification and NMR structure of ILBP, arginine residue 122 was identified as the probable contact point for the negatively charged side chain of cholyltaurine. Consequently, bile acids bind to ILBP with the steroid nucleus deep inside the protein cavity and the negatively charged side chain near the entry portal. The combination of photoaffinity labeling, enzymatic fragmentation, MALDI-mass spectrometry, and NMR structure was successfully used to determine the topology of bile acid binding to ILBP.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Arginine, http://linkedlifedata.com/resource/pubmed/chemical/Bile Acids and Salts, http://linkedlifedata.com/resource/pubmed/chemical/Carrier Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Cholagogues and Choleretics, http://linkedlifedata.com/resource/pubmed/chemical/Histidine, http://linkedlifedata.com/resource/pubmed/chemical/Organic Anion Transporters..., http://linkedlifedata.com/resource/pubmed/chemical/Phenylglyoxal, http://linkedlifedata.com/resource/pubmed/chemical/Photoaffinity Labels, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Serine, http://linkedlifedata.com/resource/pubmed/chemical/Symporters, http://linkedlifedata.com/resource/pubmed/chemical/Taurocholic Acid, http://linkedlifedata.com/resource/pubmed/chemical/Threonine, http://linkedlifedata.com/resource/pubmed/chemical/sodium-bile acid cotransporter
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
0021-9258
pubmed:author
pubmed:issnType
Print
pubmed:day
9
pubmed:volume
276
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
7291-301
pubmed:dateRevised
2004-11-17
pubmed:meshHeading
pubmed-meshheading:11069906-Amino Acid Sequence, pubmed-meshheading:11069906-Animals, pubmed-meshheading:11069906-Arginine, pubmed-meshheading:11069906-Bile Acids and Salts, pubmed-meshheading:11069906-Binding Sites, pubmed-meshheading:11069906-Carrier Proteins, pubmed-meshheading:11069906-Cholagogues and Choleretics, pubmed-meshheading:11069906-Electrophoresis, Polyacrylamide Gel, pubmed-meshheading:11069906-Histidine, pubmed-meshheading:11069906-Humans, pubmed-meshheading:11069906-Immunoblotting, pubmed-meshheading:11069906-Magnetic Resonance Spectroscopy, pubmed-meshheading:11069906-Models, Molecular, pubmed-meshheading:11069906-Molecular Sequence Data, pubmed-meshheading:11069906-Organic Anion Transporters, Sodium-Dependent, pubmed-meshheading:11069906-Phenylglyoxal, pubmed-meshheading:11069906-Photoaffinity Labels, pubmed-meshheading:11069906-Protein Binding, pubmed-meshheading:11069906-Rabbits, pubmed-meshheading:11069906-Recombinant Proteins, pubmed-meshheading:11069906-Sequence Analysis, DNA, pubmed-meshheading:11069906-Sequence Homology, Amino Acid, pubmed-meshheading:11069906-Serine, pubmed-meshheading:11069906-Spectrometry, Mass, Matrix-Assisted Laser..., pubmed-meshheading:11069906-Symporters, pubmed-meshheading:11069906-Taurocholic Acid, pubmed-meshheading:11069906-Threonine
pubmed:year
2001
pubmed:articleTitle
Identification of the bile acid-binding site of the ileal lipid-binding protein by photoaffinity labeling, matrix-assisted laser desorption ionization-mass spectrometry, and NMR structure.
pubmed:affiliation
Aventis Pharma Deutschland GmbH, DG Metabolic Diseases, D-65926 Frankfurt am Main, Germany. Werner.Kramer@aventis.com
pubmed:publicationType
Journal Article