Source:http://linkedlifedata.com/resource/pubmed/id/10867195
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
2
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pubmed:dateCreated |
2000-8-9
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pubmed:databankReference |
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF190169,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF190170,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF190171,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF190172,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/X59297
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pubmed:abstractText |
We generated rotavirus clones with rearrangement in vitro by serial passages of a human rotavirus strain (IGV-80-3) at high multiplicity of infection and determined nucleotide sequences of the rearranged genes from two distinct rotavirus clones, each of which possesses two rearranged genes: a common rearranged NSP1 gene and NSP3 gene with slightly different migration in polyacrylamide gel electrophoresis. Sequence analysis showed that the rearranged NSP1 and NSP3 genes had similar gene structures: concatemerization in a head to tail orientation and partial duplication of the open reading frame following the termination codon. The rearranged NSP1 gene had a direct repeat, whereas in the rearranged NSP3 gene, no such pattern was found.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Apr
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pubmed:issn |
0168-1702
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
67
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
163-71
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pubmed:dateRevised |
2008-11-21
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pubmed:meshHeading |
pubmed-meshheading:10867195-Blotting, Northern,
pubmed-meshheading:10867195-Cloning, Organism,
pubmed-meshheading:10867195-Gene Rearrangement,
pubmed-meshheading:10867195-Genes, Viral,
pubmed-meshheading:10867195-Genetic Variation,
pubmed-meshheading:10867195-Humans,
pubmed-meshheading:10867195-Molecular Sequence Data,
pubmed-meshheading:10867195-RNA, Viral,
pubmed-meshheading:10867195-Reverse Transcriptase Polymerase Chain Reaction,
pubmed-meshheading:10867195-Rotavirus,
pubmed-meshheading:10867195-Sequence Analysis
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pubmed:year |
2000
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pubmed:articleTitle |
Rearrangement generated in double genes, NSP1 and NSP3, of viable progenies from a human rotavirus strain.
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pubmed:affiliation |
Department of Hygiene, Sapporo Medical University School of Medicine, Japan. kkojima@sapmed.ac.jp
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pubmed:publicationType |
Journal Article,
Comparative Study,
Research Support, Non-U.S. Gov't
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