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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
26
pubmed:dateCreated
2000-8-10
pubmed:abstractText
1-Deoxy-d-xylulose 5-phosphate (DXP) reductoisomerase, which simultaneously catalyzes the intramolecular rearrangement and reduction of DXP to form 2-C-methyl-d-erythritol 4-phosphate, constitutes a key enzyme of an alternative mevalonate-independent pathway for isopentenyl diphosphate biosynthesis. The dxr gene encoding this enzyme from Escherichia coli was overexpressed as a histidine-tagged protein and characterized in detail. DNA sequencing analysis of the dxr genes from 10 E. coli dxr-deficient mutants revealed base substitution mutations at four points: two nonsense mutations and two amino acid substitutions (Gly(14) to Asp(14) and Glu(231) to Lys(231)). Diethyl pyrocarbonate treatment inactivated DXP reductoisomerase, and subsequent hydroxylamine treatment restored the activity of the diethyl pyrocarbonate-treated enzyme. To characterize these defects, we overexpressed the mutant enzymes G14D, E231K, H153Q, H209Q, and H257Q. All of these mutant enzymes except for G14D were obtained as soluble proteins. Although the purified enzyme E231K had wild-type K(m) values for DXP and NADPH, the mutant enzyme had less than a 0.24% wild-type k(cat) value. K(m) values of H153Q, H209Q, and H257Q for DXP increased to 3.5-, 7.6-, and 19-fold the wild-type value, respectively. These results indicate that Glu(231) of E. coli DXP reductoisomerase plays an important role(s) in the conversion of DXP to 2-C-methyl-d-erythritol 4-phosphate, and that His(153), His(209), and His(257), in part, associate with DXP binding in the enzyme molecule.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
0021-9258
pubmed:author
pubmed:issnType
Print
pubmed:day
30
pubmed:volume
275
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
19928-32
pubmed:dateRevised
2011-11-17
pubmed:meshHeading
pubmed-meshheading:10787409-Aldose-Ketose Isomerases, pubmed-meshheading:10787409-Amino Acid Sequence, pubmed-meshheading:10787409-Catalysis, pubmed-meshheading:10787409-Diethyl Pyrocarbonate, pubmed-meshheading:10787409-Electrophoresis, Polyacrylamide Gel, pubmed-meshheading:10787409-Enzyme Stability, pubmed-meshheading:10787409-Escherichia coli, pubmed-meshheading:10787409-Hemiterpenes, pubmed-meshheading:10787409-Hydrogen-Ion Concentration, pubmed-meshheading:10787409-Kinetics, pubmed-meshheading:10787409-Methylnitronitrosoguanidine, pubmed-meshheading:10787409-Molecular Sequence Data, pubmed-meshheading:10787409-Multienzyme Complexes, pubmed-meshheading:10787409-Mutagenesis, Site-Directed, pubmed-meshheading:10787409-Mutation, pubmed-meshheading:10787409-Organophosphorus Compounds, pubmed-meshheading:10787409-Oxidoreductases, pubmed-meshheading:10787409-Plasmids, pubmed-meshheading:10787409-Recombinant Proteins, pubmed-meshheading:10787409-Sequence Analysis, DNA, pubmed-meshheading:10787409-Sequence Homology, Amino Acid, pubmed-meshheading:10787409-Temperature
pubmed:year
2000
pubmed:articleTitle
Characterization of 1-deoxy-D-xylulose 5-phosphate reductoisomerase, an enzyme involved in isopentenyl diphosphate biosynthesis, and identification of its catalytic amino acid residues.
pubmed:affiliation
Institute of Molecular and Cellular Biosciences, University of Tokyo, Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't