Source:http://linkedlifedata.com/resource/pubmed/id/10746791
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
2
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pubmed:dateCreated |
2000-8-15
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pubmed:abstractText |
We report the evaluation of MHC class II polymorphism in the population of Turkey. HLA-DRB1, -DQA1 and -DQB1 have been investigated by polymerase chain reaction and sequence-specific oligonucleotide probe hybridisations (PCR/SSO) and sequence-specific priming (SSP) in 250 randomly selected healthy individuals. We also report the allelic distribution of these genes. The most frequent alleles detected were DRB1*1101 (0.104), *0301 (0.092), *0701 (0.090), DQA1*0501 (0.334), *0102 (0.164) and *03 (0.148) and DQB1*0301 (0.256), *02 (0.164), *0302 (0.128). The frequent 'putative' three-locus haplotypes carry the most frequent alleles at these loci. The most frequently detected class II "haplotypes" are DRB1*1101 DQA1*0501 DQB1*0301 (0.100), DRB1*0301 DQA1*0501 DQB1*02 (0.092) and DRB1*0701 DQA1*0201 DQB1*02 (0.072). The distribution of alleles and 'putative' haplotypes has shown common features with other Mediterranean populations. The results extend the HLA map to another Mediterranean country and provide a database for further HLA-disease association studies and transplantation applications.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/HLA-DQ Antigens,
http://linkedlifedata.com/resource/pubmed/chemical/HLA-DQ alpha-Chains,
http://linkedlifedata.com/resource/pubmed/chemical/HLA-DQ beta-Chains,
http://linkedlifedata.com/resource/pubmed/chemical/HLA-DQA1 antigen,
http://linkedlifedata.com/resource/pubmed/chemical/HLA-DQB1 antigen,
http://linkedlifedata.com/resource/pubmed/chemical/HLA-DR Antigens,
http://linkedlifedata.com/resource/pubmed/chemical/HLA-DRB1*03:01 antigen,
http://linkedlifedata.com/resource/pubmed/chemical/HLA-DRB1 Chains
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pubmed:status |
MEDLINE
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pubmed:month |
Feb
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pubmed:issn |
0001-2815
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
55
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
171-4
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pubmed:dateRevised |
2011-11-17
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pubmed:meshHeading |
pubmed-meshheading:10746791-Alleles,
pubmed-meshheading:10746791-Gene Frequency,
pubmed-meshheading:10746791-HLA-DQ Antigens,
pubmed-meshheading:10746791-HLA-DQ alpha-Chains,
pubmed-meshheading:10746791-HLA-DQ beta-Chains,
pubmed-meshheading:10746791-HLA-DR Antigens,
pubmed-meshheading:10746791-HLA-DRB1 Chains,
pubmed-meshheading:10746791-Humans,
pubmed-meshheading:10746791-Polymorphism, Genetic,
pubmed-meshheading:10746791-Turkey
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pubmed:year |
2000
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pubmed:articleTitle |
Molecular analysis of HLA-DRB1, -DQA1 and -DQB1 polymorphism in Turkey.
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pubmed:affiliation |
Istanbul University, Electro-Neurophysiology Research and Application Centre, Turkey. gsaruhan@istanbul.edu.tr
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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