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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
26
pubmed:dateCreated
2000-1-27
pubmed:abstractText
Members of the transforming growth factor-beta family play critical roles in body patterning, in both vertebrates and invertebrates. One transforming growth factor-beta-related gene, dbl-1, has been shown to regulate body length and male ray patterning in Caenorhabditis elegans. We screened arrayed cDNAs to identify downstream target genes for the DBL-1 signaling by using differential hybridization. C. elegans cDNAs representing 7,584 independent genes were arrayed on a nylon membrane at high density and hybridized with (33)P-labeled DNA probes synthesized from the mRNAs of wild-type, dbl-1, sma-2, and lon-2 worms. Signals for all the spots representing hybridized DNA were quantified and compared among strains. The screening identified 22 and 2 clones, which were positively and negatively regulated, respectively, by the DBL-1 signal. Northern hybridization confirmed the expression profiles of most of the clones, indicating good reliability of the differential hybridization using arrayed cDNAs. In situ hybridization analysis revealed the spatial and temporal expression patterns of each clone and showed that at least four genes, including the gene for the type I receptor for DBL-1, sma-6, were transcriptionally regulated by the DBL-1 signal.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-10021351, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-1641346, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-3409326, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-4366476, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-7569999, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-7758958, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-8187641, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-8299934, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-8530073, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-8682290, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-9381177, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-9442061, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-9811572, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-9843569, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-9847238, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-9847239, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-9851916, http://linkedlifedata.com/resource/pubmed/commentcorrection/10611331-9872747
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
21
pubmed:volume
96
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
15020-5
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:10611331-Animals, pubmed-meshheading:10611331-Blotting, Northern, pubmed-meshheading:10611331-Caenorhabditis elegans, pubmed-meshheading:10611331-Caenorhabditis elegans Proteins, pubmed-meshheading:10611331-DNA, Complementary, pubmed-meshheading:10611331-Gene Expression, pubmed-meshheading:10611331-Gene Expression Profiling, pubmed-meshheading:10611331-Genes, Helminth, pubmed-meshheading:10611331-In Situ Hybridization, pubmed-meshheading:10611331-Intestines, pubmed-meshheading:10611331-Male, pubmed-meshheading:10611331-Neuropeptides, pubmed-meshheading:10611331-Nucleic Acid Hybridization, pubmed-meshheading:10611331-Oligonucleotide Array Sequence Analysis, pubmed-meshheading:10611331-Signal Transduction, pubmed-meshheading:10611331-Tissue Distribution, pubmed-meshheading:10611331-Transforming Growth Factor beta
pubmed:year
1999
pubmed:articleTitle
Identification of transforming growth factor-beta- regulated genes in caenorhabditis elegans by differential hybridization of arrayed cDNAs.
pubmed:affiliation
Department of Developmental Biology, National Institute for Basic Biology, Okazaki 444-8585, Japan. mochii@nibb.ac.jp
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't