Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
10
pubmed:dateCreated
1999-10-14
pubmed:databankReference
pubmed:abstractText
The complete nucleotide sequence and organization of the enteropathogenic Escherichia coli (EPEC) adherence factor (EAF) plasmid of EPEC strain B171 (O111:NM) were determined. The EAF plasmid encodes two known virulence-related operons, the bfp operon, which is composed of genes necessary for biosynthesis of bundle-forming pili, and the bfpTVW (perABC) operon, composed of regulatory genes required for bfp transcription and also for transcriptional activation of the eae gene in the LEE pathogenicity island on the EPEC chromosome. The 69-kb EAF plasmid, henceforth designated pB171, contains, besides the bfp and bfpTVW (perABC) operons, potential virulence-associated genes, plasmid replication and maintenance genes, and many insertion sequence elements. Of the newly identified open reading frames (ORFs), two which comprise a single operon had the potential to encode proteins with high similarity to a C-terminal region of ToxB whose coding sequence is located on pO157, a large plasmid harbored by enterohemorrhagic E. coli. Another ORF, located between the bfp and bfpTVW operons, showed high similarity with trcA, a bfpT-regulated chaperone-like protein gene of EPEC. Two sites were found to be putative replication regions: one similar to RepFIIA of p307 or F, and the other similar to RepFIB of R100 (NR1). In addition, we identified a third region that contains plasmid maintenance genes. Insertion elements were scattered throughout the plasmid, indicating the mosaic nature of the EAF plasmid and suggesting evolutionary events by which virulence genes may have been obtained.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-1362446, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-1495389, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-1683004, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2172966, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2263498, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2550985, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2552264, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2647635, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2651415, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2863318, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2863319, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2888732, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-2987844, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-3023637, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-3050127, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-3172224, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-3539808, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-3543152, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-6092059, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-6095299, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-6265806, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-6352891, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-7003300, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-7729884, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-7926680, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-7954817, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8004173, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8021196, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8055465, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8096320, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8104225, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8376594, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8626330, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8682809, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8733231, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8861207, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8885264, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-8885267, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9080609, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9099859, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9353040, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9484886, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9593291, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9628576, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9641917, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9722640, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9748454, http://linkedlifedata.com/resource/pubmed/commentcorrection/10496929-9826348
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
0019-9567
pubmed:author
pubmed:issnType
Print
pubmed:volume
67
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
5455-62
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
1999
pubmed:articleTitle
Complete DNA sequence and structural analysis of the enteropathogenic Escherichia coli adherence factor plasmid.
pubmed:affiliation
Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minatoku, Tokyo 108-8639, Japan. torutobe@ims.u-tokyo.ac.jp
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't