Source:http://linkedlifedata.com/resource/pubmed/id/10433696
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
31
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pubmed:dateCreated |
1999-9-3
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pubmed:abstractText |
The conformational stability of a small ( approximately 7 kDa), all beta-sheet protein, cardiotoxin analogue III (CTX III), from the venom of the Taiwan cobra has been investigated by hydrogen-deuterium (H/D) exchange using two-dimensional NMR spectroscopy. The H/D exchange kinetics of backbone amide protons in CTX III has been monitored at pD 3.6 and 6.6 (at 25 degrees C), for over 5000 h. Examination of H/D exchange kinetics in the protein showed that a number of slowly exchanging residues are in the hydrophobic core of the protein. The average protection factor of the amide protons of residues belonging to the triple-stranded beta-sheet domain is about 20 times greater than that of those in the double-stranded beta-sheet segment. The residues in the C-terminal tail of the molecule, though structureless, have been found to exhibit significant protection against H/D exchange. Comparison of the quenched-flow H/D exchange data on CTX III with those obtained in the present study reveals that the most slowly exchanging portion constitutes the folding core of the protein.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Amides,
http://linkedlifedata.com/resource/pubmed/chemical/Amino Acids,
http://linkedlifedata.com/resource/pubmed/chemical/Cobra Cardiotoxin Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/Deuterium Oxide,
http://linkedlifedata.com/resource/pubmed/chemical/Guanidine,
http://linkedlifedata.com/resource/pubmed/chemical/Protons,
http://linkedlifedata.com/resource/pubmed/chemical/cardiotoxin III, Naja naja atra
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pubmed:status |
MEDLINE
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pubmed:month |
Aug
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pubmed:issn |
0006-2960
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
3
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pubmed:volume |
38
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
9899-905
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pubmed:dateRevised |
2007-11-15
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pubmed:meshHeading |
pubmed-meshheading:10433696-Amides,
pubmed-meshheading:10433696-Amino Acids,
pubmed-meshheading:10433696-Animals,
pubmed-meshheading:10433696-Cobra Cardiotoxin Proteins,
pubmed-meshheading:10433696-Deuterium Oxide,
pubmed-meshheading:10433696-Guanidine,
pubmed-meshheading:10433696-Kinetics,
pubmed-meshheading:10433696-Models, Molecular,
pubmed-meshheading:10433696-Nuclear Magnetic Resonance, Biomolecular,
pubmed-meshheading:10433696-Protein Conformation,
pubmed-meshheading:10433696-Protein Denaturation,
pubmed-meshheading:10433696-Protein Folding,
pubmed-meshheading:10433696-Protein Structure, Secondary,
pubmed-meshheading:10433696-Protons
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pubmed:year |
1999
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pubmed:articleTitle |
Investigation of the structural stability of cardiotoxin analogue III from the Taiwan cobra by hydrogen-deuterium exchange kinetics.
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pubmed:affiliation |
Department of Chemistry, National Tsing Hua University, Hsinchu, Taiwan.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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