Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
4
pubmed:dateCreated
1999-10-12
pubmed:abstractText
We have used genetic methods in Methanococcus maripaludis to study nitrogen metabolism and its regulation. We present evidence for a "nitrogen regulon" in Methanococcus and Methanobacterium species containing genes of nitrogen metabolism that are regulated coordinately at the transcriptional level via a common repressor binding site sequence, or operator. The implied mechanism for regulation resembles the general bacterial paradigm for repression, but contrasts with well-known mechanisms of nitrogen regulation in bacteria, which occur by activation. Genes in the nitrogen regulons include those for nitrogen fixation, glutamine synthetase, (methyl)ammonia transport, the regulatory protein GlnB, and ammonia-dependent NAD synthetase, as well as a gene of unknown function. We also studied the function of two novel GlnB homologues that are encoded within the nif gene cluster of diazotrophic methanogens. The phenotype resulting from a glnB null mutation in M. maripaludis provides direct evidence that glnB-like genes are involved in "ammonia switch-off," the post-transcriptional inhibition of nitrogen fixation upon addition of ammonia. Finally, we show that the gene nifX is not required for nitrogen fixation, in agreement with findings in several bacteria. These studies illustrate the utility of genetic methods in M. maripaludis and show the enhanced perspective that studies in the Archaea can bring to known biological systems.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-10217770, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-15299730, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-1577701, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-16347675, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-1768149, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-1938894, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-2068380, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-2196433, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-2254255, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-2838639, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-6504143, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-7592322, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-7916055, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-8098326, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-8226614, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-8226619, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-8550408, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-8688087, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-8759845, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-8843440, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-8900017, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9037050, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9139917, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9209053, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9209054, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9233538, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9371463, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9389475, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9515920, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9573149, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9573159, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9618533, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9720863, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9721319, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9733647, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9737856, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9737857, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9852012, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9864338, http://linkedlifedata.com/resource/pubmed/commentcorrection/10430565-9973341
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
0016-6731
pubmed:author
pubmed:issnType
Print
pubmed:volume
152
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1343-51
pubmed:dateRevised
2010-9-10
pubmed:meshHeading
pubmed-meshheading:10430565-Amino Acid Sequence, pubmed-meshheading:10430565-Archaeal Proteins, pubmed-meshheading:10430565-Bacterial Proteins, pubmed-meshheading:10430565-Binding Sites, pubmed-meshheading:10430565-Gene Expression Regulation, Archaeal, pubmed-meshheading:10430565-Genes, Archaeal, pubmed-meshheading:10430565-Methanococcus, pubmed-meshheading:10430565-Molecular Sequence Data, pubmed-meshheading:10430565-Mutagenesis, Site-Directed, pubmed-meshheading:10430565-Nitrogen Fixation, pubmed-meshheading:10430565-PII Nitrogen Regulatory Proteins, pubmed-meshheading:10430565-Regulon, pubmed-meshheading:10430565-Repressor Proteins, pubmed-meshheading:10430565-Sequence Alignment, pubmed-meshheading:10430565-Sequence Deletion, pubmed-meshheading:10430565-Sequence Homology, Amino Acid, pubmed-meshheading:10430565-Transcription, Genetic
pubmed:year
1999
pubmed:articleTitle
Genetics of nitrogen regulation in Methanococcus maripaludis.
pubmed:affiliation
Department of Microbiology, University of Washington, Seattle, Washington 98195, USA.
pubmed:publicationType
Journal Article, Comparative Study, Research Support, U.S. Gov't, P.H.S., Research Support, U.S. Gov't, Non-P.H.S.