Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
1999-4-13
pubmed:abstractText
Partly because of the lack of a suitable in vitro model, the trigger(s) and the mechanism(s) of somatic hypermutation in Ig genes are largely unknown. We have analyzed the hypermutation potential of human CL-01 lymphocytes, our monoclonal model of germinal center B cell differentiation. These cells are surface IgM+ IgD+ and, in the absence of T cells, switch to IgG, IgA, and IgE in response to CD40:CD40 ligand engagement and exposure to appropriate cytokines. We show here that CL-01 cells can be induced to effectively mutate the expressed VHDJH-C mu, VHDJH-C delta, VHDJH-C gamma, VHDJH-C alpha, VHDJH-C epsilon, and V lambda J lambda-C lambda transcripts before and after Ig class switching in a stepwise fashion. In these cells, induction of somatic mutations required cross-linking of the surface receptor for Ag and T cell contact through CD40:CD40 ligand and CD80: CD28 coengagement. The induced mutations showed intrinsic features of Ig V(D)J hypermutation in that they comprised 110 base substitutions (97 in the heavy chain and 13 in the lambda-chain) and only 2 deletions and targeted V(D)J, virtually sparing CH and C lambda. These mutations were more abundant in secondary VHDJH-C gamma than primary VHDJH-C mu transcripts and in V(D)J-C than V lambda J lambda-C lambda transcripts. These mutations were also associated with coding DNA strand polarity and showed an overall rate of 2.42 x 10(-4) base changes/cell division in VHDJH-CH transcripts. Transitions were favored over transversions, and G nucleotides were preferentially targeted, mainly in the context of AG dinucleotides. Thus, in CL-01 cells, Ig somatic hypermutation is readily inducible by stimuli different from those required for class switching and displays discrete base substitution modalities.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
AIM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Antibodies, Monoclonal, http://linkedlifedata.com/resource/pubmed/chemical/Antigens, CD28, http://linkedlifedata.com/resource/pubmed/chemical/Antigens, CD40, http://linkedlifedata.com/resource/pubmed/chemical/Antigens, CD80, http://linkedlifedata.com/resource/pubmed/chemical/CD40 Ligand, http://linkedlifedata.com/resource/pubmed/chemical/Codon, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin A, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin D, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin E, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin G, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin Heavy Chains, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin J-Chains, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin M, http://linkedlifedata.com/resource/pubmed/chemical/Immunoglobulin Variable Region, http://linkedlifedata.com/resource/pubmed/chemical/Ligands, http://linkedlifedata.com/resource/pubmed/chemical/Membrane Glycoproteins
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
0022-1767
pubmed:author
pubmed:issnType
Print
pubmed:day
15
pubmed:volume
162
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3437-47
pubmed:dateRevised
2007-11-14
pubmed:meshHeading
pubmed-meshheading:10092799-Amino Acid Sequence, pubmed-meshheading:10092799-Antibodies, Monoclonal, pubmed-meshheading:10092799-Antigens, CD28, pubmed-meshheading:10092799-Antigens, CD40, pubmed-meshheading:10092799-Antigens, CD80, pubmed-meshheading:10092799-B-Lymphocytes, pubmed-meshheading:10092799-Base Composition, pubmed-meshheading:10092799-Base Sequence, pubmed-meshheading:10092799-CD40 Ligand, pubmed-meshheading:10092799-Cell Line, pubmed-meshheading:10092799-Clone Cells, pubmed-meshheading:10092799-Codon, pubmed-meshheading:10092799-DNA Mutational Analysis, pubmed-meshheading:10092799-Genes, Immunoglobulin, pubmed-meshheading:10092799-Humans, pubmed-meshheading:10092799-Immunoglobulin A, pubmed-meshheading:10092799-Immunoglobulin Class Switching, pubmed-meshheading:10092799-Immunoglobulin D, pubmed-meshheading:10092799-Immunoglobulin E, pubmed-meshheading:10092799-Immunoglobulin G, pubmed-meshheading:10092799-Immunoglobulin Heavy Chains, pubmed-meshheading:10092799-Immunoglobulin J-Chains, pubmed-meshheading:10092799-Immunoglobulin M, pubmed-meshheading:10092799-Immunoglobulin Variable Region, pubmed-meshheading:10092799-Ligands, pubmed-meshheading:10092799-Membrane Glycoproteins, pubmed-meshheading:10092799-Molecular Sequence Data, pubmed-meshheading:10092799-Point Mutation
pubmed:year
1999
pubmed:articleTitle
Induction of Ig somatic hypermutation and class switching in a human monoclonal IgM+ IgD+ B cell line in vitro: definition of the requirements and modalities of hypermutation.
pubmed:affiliation
Department of Pathology, Weill Medical College, Cornell University, New York 10021, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S.