PLoS Genet.

The marine bacterium Saccharophagus degradans strain 2-40 (Sde 2-40) is emerging as a vanguard of a recently discovered group of marine and estuarine bacteria that recycles complex polysaccharides. We report its complete genome sequence, analysis of which identifies an unusually large number of enzymes that degrade >10 complex polysaccharides. Not only is this an extraordinary range of catabolic capability, many of the enzymes exhibit unusual architecture including novel combinations of catalytic and substrate-binding modules. We hypothesize that many of these features are adaptations that facilitate depolymerization of complex polysaccharides in the marine environment. This is the first sequenced genome of a marine bacterium that can degrade plant cell walls, an important component of the carbon cycle that is not well-characterized in the marine environment.

Source:http://purl.uniprot.org/citations/18516288

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http://purl.uniprot.org/cit...rdfs:commentThe marine bacterium Saccharophagus degradans strain 2-40 (Sde 2-40) is emerging as a vanguard of a recently discovered group of marine and estuarine bacteria that recycles complex polysaccharides. We report its complete genome sequence, analysis of which identifies an unusually large number of enzymes that degrade >10 complex polysaccharides. Not only is this an extraordinary range of catabolic capability, many of the enzymes exhibit unusual architecture including novel combinations of catalytic and substrate-binding modules. We hypothesize that many of these features are adaptations that facilitate depolymerization of complex polysaccharides in the marine environment. This is the first sequenced genome of a marine bacterium that can degrade plant cell walls, an important component of the carbon cycle that is not well-characterized in the marine environment.lld:uniprot
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http://purl.uniprot.org/cit...uniprot:authorGilbert H.J.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorZhang H.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorLamed R.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorBayer E.A.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorHenrissat B.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorWeiner R.M.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorLand M.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorRichardson P.M.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorBorovok I.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorHauser L.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorZhulin I.B.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorCoutinho P.M.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorLarimer F.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorEkborg N.A.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorRancurel C.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorSaunders E.H.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorTaylor L.E. IIlld:uniprot
http://purl.uniprot.org/cit...uniprot:authorLongmire A.G.lld:uniprot
http://purl.uniprot.org/cit...uniprot:authorHutcheson S.lld:uniprot
http://purl.uniprot.org/cit...uniprot:date2008lld:uniprot
http://purl.uniprot.org/cit...uniprot:pagesE1000087lld:uniprot
http://purl.uniprot.org/cit...uniprot:titleComplete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T.lld:uniprot
http://purl.uniprot.org/cit...uniprot:volume4lld:uniprot
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