Source:http://biocyc.org/biopax/biopax-level3ChemicalStructure161453
| Subject | Predicate | Object | Context |
|---|---|---|---|
| http://biocyc.org/biopax/bi... | rdf:type | biopax3:ChemicalStructure | lld:biopax3 |
| http://biocyc.org/biopax/bi... | biopax3:structureData | <cml> <molecule id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL" title="alpha-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-N-acetyl-D-glucosaminyl-[glycoprotein]" formalCharge="0" dictRef="dictALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL"> <atomArray> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom1" elementType="C" x2="8648.0" y2="-4216.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom2" elementType="O" x2="7539.0" y2="-3223.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom3" elementType="O" x2="0.0" y2="-3300.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom4" elementType="O" x2="923.0" y2="-4873.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom5" elementType="O" x2="3799.0" y2="-6021.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom6" elementType="O" x2="1429.0" y2="0.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom7" elementType="O" x2="0.0" y2="-825.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom8" elementType="O" x2="2858.0" y2="-825.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom9" elementType="O" x2="1439.0" y2="-3507.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom10" elementType="O" x2="4264.0" y2="-3068.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom11" elementType="O" x2="5940.0" y2="-3842.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom12" elementType="C" x2="0.0" y2="-2475.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom13" elementType="C" x2="1710.0" y2="-5144.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom14" elementType="C" x2="4548.0" y2="-6344.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom15" elementType="N" x2="7384.0" y2="-4654.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom16" elementType="O" x2="7410.0" y2="-6305.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom17" elementType="O" x2="1429.0" y2="-2475.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom18" elementType="O" x2="3116.0" y2="-4925.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom19" elementType="O" x2="5940.0" y2="-6331.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom20" elementType="O" x2="2858.0" y2="-2475.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom21" elementType="O" x2="4522.0" y2="-4693.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom22" elementType="C" x2="7848.0" y2="-3971.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom23" elementType="C" x2="1429.0" y2="-825.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom24" elementType="C" x2="714.0" y2="-1238.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom25" elementType="C" x2="2143.0" y2="-1238.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom26" elementType="C" x2="2213.0" y2="-3803.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom27" elementType="C" x2="3632.0" y2="-3584.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom28" elementType="C" x2="5940.0" y2="-4680.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom29" elementType="C" x2="714.0" y2="-2062.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom30" elementType="C" x2="2342.0" y2="-4629.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom31" elementType="C" x2="5256.0" y2="-5918.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom32" elementType="C" x2="2143.0" y2="-2062.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom33" elementType="C" x2="3760.0" y2="-4397.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom34" elementType="C" x2="6688.0" y2="-5905.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom35" elementType="C" x2="6688.0" y2="-5080.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom36" elementType="C" x2="2858.0" y2="-3300.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom37" elementType="C" x2="5256.0" y2="-5106.0"/> <atom id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom38" elementType="General-Glycoprotein-Substrates" x2="7410.0" y2="-7130.0"/> </atomArray> <bondArray> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond1" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom34 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom35" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond2" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom31 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom37" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond3" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom28 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom37" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond4" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom28 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom35" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond5" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom27 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom36" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond6" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom27 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom33" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond7" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom26 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom36" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond8" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom26 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom30" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond9" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom25 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom32" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond10" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom24 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom29" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond11" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom23 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom25" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond12" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom23 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom24" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond13" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom37 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom21" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond14" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom33 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom21" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond15" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom36 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom20" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond16" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom32 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom20" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond17" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom19 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom34" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond18" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom19 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom31" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond19" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom18 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom33" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond20" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom18 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom30" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond21" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom17 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom32" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond22" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom17 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom29" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond23" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom34 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom16" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond24" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom35 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom15" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond25" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom15 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom22" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond26" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom31 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom14" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond27" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom30 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom13" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond28" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom29 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom12" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond29" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom28 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom11" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond30" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom27 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom10" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond31" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom26 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom9" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond32" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom25 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom8" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond33" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom24 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom7" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond34" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom23 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom6" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond35" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom5 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom14" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond36" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom4 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom13" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond37" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom3 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom12" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond38" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom2 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom22" order="2"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond39" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom1 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom22" order="1"/> <bond id="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-bond40" atomRefs="ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom16 ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL-atom38" order="1"/> </bondArray> <formula concise=""/> <string title="smiles">CC(=O)NC3(C(O)C(OC2(OC(CO)C(O)C(OC1(OC(CO)C(O)C(O)C(O)1))C(O)2))C(CO)OC(O[a glycoprotein])3)</string> </molecule> </cml> | lld:biopax3 |
| http://biocyc.org/biopax/bi... | biopax3:structureFormat | CML | lld:biopax3 |
| http://biocyc.org/biopax/bi... | biopax3:structure | http://biocyc.org/biopax/bi... | lld:biopax3 |