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pubmed-article:12601078pubmed:dateCreated2003-2-25lld:pubmed
pubmed-article:12601078pubmed:abstractTextThe potential of photoaptamers as proteomic probes was investigated. Photoaptamers are defined as aptamers that bear photocross-linking functionality, in this report, 5-bromo-2'-deoxyuridine. A key question regarding the use of photoaptamer probes is the specificity of the cross-linking reaction. The specificity of three photoaptamers was explored by comparing their reactions with target proteins and non-target proteins. The range of target/non-target specificity varies from 100- to >10(6)-fold with most values >10(4)-fold. The contributions of the initial binding step and the photocross-linking step were evaluated for each reaction. Photocross-linking never degraded specificity and significantly increased aptamer specificity in some cases. The application of photoaptamer technology to proteomics was investigated in microarray format. Immobilized anti-human immunodeficiency virus-gp120 aptamer was able to detect subnanomolar concentrations of target protein in 5% human serum. The levels of sensitivity and specificity displayed by photoaptamers, combined with other advantageous properties of aptamers, should facilitate development of protein chip technology.lld:pubmed
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pubmed-article:12601078pubmed:authorpubmed-author:KochTad HTHlld:pubmed
pubmed-article:12601078pubmed:authorpubmed-author:SmithDrewDlld:pubmed
pubmed-article:12601078pubmed:authorpubmed-author:CollinsBrian...lld:pubmed
pubmed-article:12601078pubmed:authorpubmed-author:HeilJamesJlld:pubmed
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pubmed-article:12601078pubmed:pagination11-8lld:pubmed
pubmed-article:12601078pubmed:dateRevised2006-11-15lld:pubmed
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pubmed-article:12601078pubmed:year2003lld:pubmed
pubmed-article:12601078pubmed:articleTitleSensitivity and specificity of photoaptamer probes.lld:pubmed
pubmed-article:12601078pubmed:affiliationSomaLogic, Inc, Boulder, Colorado 80301, USA. drew.smith@somalogic.comlld:pubmed
pubmed-article:12601078pubmed:publicationTypeJournal Articlelld:pubmed
pubmed-article:12601078pubmed:publicationTypeResearch Support, Non-U.S. Gov'tlld:pubmed
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