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pubmed-article:21297948pubmed:abstractTextWe applied a novel application of FLIM-FRET to in situ measurement and quantification of protein interactions to explore isoform specific differences in A?-ApoE interaction and ApoE tertiary conformation in senile plaques in human Alzheimer brain. ApoE3 interacts more closely with A? than ApoE4, but a greater proportion of A? molecules within plaques are decorated with ApoE4 than ApoE3, lending strong support to the hypothesis that isoform specific differences in ApoE are linked with A? deposition. We found an increased number of ApoE N-terminal fragments in ApoE4 plaques, consistent with the observation that ApoE4 is more easily cleaved than ApoE3. In addition, we measured a small but significant isoform specific difference in ApoE domain interaction. Based on our in situ data, supported by traditional biochemical data, we propose a pathway by which isoform specific conformational differences increase the level of cleavage at the hinge region of ApoE4, leading to a loss of ApoE function to mediate clearance of A? and thereby increase the risk of AD for carriers of the APOE?4 allele.lld:pubmed
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