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pubmed-article:20845954rdf:typepubmed:Citationlld:pubmed
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pubmed-article:20845954pubmed:issue10lld:pubmed
pubmed-article:20845954pubmed:dateCreated2010-10-25lld:pubmed
pubmed-article:20845954pubmed:abstractTextAs high-throughput biochemical screens are both expensive and labor intensive, researchers in academia and industry are turning increasingly to virtual-screening methodologies. Virtual screening relies on scoring functions to quickly assess ligand potency. Although useful for in silico ligand identification, these scoring functions generally give many false positives and negatives; indeed, a properly trained human being can often assess ligand potency by visual inspection with greater accuracy. Given the success of the human mind at protein-ligand complex characterization, we present here a scoring function based on a neural network, a computational model that attempts to simulate, albeit inadequately, the microscopic organization of the brain. Computer-aided drug design depends on fast and accurate scoring functions to aid in the identification of small-molecule ligands. The scoring function presented here, used either on its own or in conjunction with other more traditional functions, could prove useful in future drug-discovery efforts.lld:pubmed
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pubmed-article:20845954pubmed:statusMEDLINElld:pubmed
pubmed-article:20845954pubmed:monthOctlld:pubmed
pubmed-article:20845954pubmed:issn1549-960Xlld:pubmed
pubmed-article:20845954pubmed:authorpubmed-author:McCammonJ...lld:pubmed
pubmed-article:20845954pubmed:authorpubmed-author:DurrantJacob...lld:pubmed
pubmed-article:20845954pubmed:issnTypeElectroniclld:pubmed
pubmed-article:20845954pubmed:day25lld:pubmed
pubmed-article:20845954pubmed:volume50lld:pubmed
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pubmed-article:20845954pubmed:authorsCompleteYlld:pubmed
pubmed-article:20845954pubmed:pagination1865-71lld:pubmed
pubmed-article:20845954pubmed:dateRevised2011-3-17lld:pubmed
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pubmed-article:20845954pubmed:year2010lld:pubmed
pubmed-article:20845954pubmed:articleTitleNNScore: a neural-network-based scoring function for the characterization of protein-ligand complexes.lld:pubmed
pubmed-article:20845954pubmed:affiliationDepartment of Chemistry & Biochemistry, NSF Center for Theoretical Biological Physics, National Biomedical Computation Resource, Howard Hughes Medical Institute, University of California San Diego, La Jolla, California 92093, USA. jdurrant@ucsd.edulld:pubmed
pubmed-article:20845954pubmed:publicationTypeJournal Articlelld:pubmed
pubmed-article:20845954pubmed:publicationTypeResearch Support, Non-U.S. Gov'tlld:pubmed