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pubmed-article:19284572pubmed:abstractTextHuman cells of various tissue types differ greatly in morphology despite having the same set of genetic information. Some genes are expressed in all cell types to perform house-keeping functions, while some are selectively expressed to perform tissue-specific functions. In this study, we wished to elucidate how proteins encoded by human house-keeping genes and tissue-specific genes are organized in human protein-protein interaction networks. We constructed protein-protein interaction networks for different tissue types using two gene expression datasets and one protein-protein interaction database. We then calculated three network indices of topological importance, the degree, closeness, and betweenness centralities, to measure the network position of proteins encoded by house-keeping and tissue-specific genes, and quantified their local connectivity structure.lld:pubmed
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pubmed-article:19284572pubmed:authorpubmed-author:HwangMing-Jin...lld:pubmed
pubmed-article:19284572pubmed:authorpubmed-author:LinWen-HsienW...lld:pubmed
pubmed-article:19284572pubmed:authorpubmed-author:LiuWei-ChungW...lld:pubmed
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pubmed-article:19284572pubmed:dateRevised2010-9-23lld:pubmed
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pubmed-article:19284572pubmed:articleTitleTopological and organizational properties of the products of house-keeping and tissue-specific genes in protein-protein interaction networks.lld:pubmed
pubmed-article:19284572pubmed:affiliationInstitute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan. heliosy@gmail.comlld:pubmed
pubmed-article:19284572pubmed:publicationTypeJournal Articlelld:pubmed
pubmed-article:19284572pubmed:publicationTypeResearch Support, Non-U.S. Gov'tlld:pubmed