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pubmed-article:18323628pubmed:abstractTextThe crystal structures of D-amino-acid amidase (DAA) from Ochrobactrum anthropi SV3 in complex with L-phenylalanine and with L-phenylalanine amide were determined at 2.3 and 2.2 A resolution, respectively. Comparison of the L-phenylalanine amide complex with the D-phenylalanine complex reveals that the D-stereospecificity of DAA might be achieved as a consequence of three structural factors: (i) the hydrophobic cavity in the region in which the hydrophobic side chain of the substrate is held, (ii) the spatial arrangement of Gln310 O and Glu114 O epsilon2 that fixes the amino N atom of the substrate and (iii) the existence of two cavities that keep the carboxyl/amide group of the substrate near or apart from Ser60 O gamma.lld:pubmed
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pubmed-article:18323628pubmed:articleTitleStructures of D-amino-acid amidase complexed with L-phenylalanine and with L-phenylalanine amide: insight into the D-stereospecificity of D-amino-acid amidase from Ochrobactrum anthropi SV3.lld:pubmed
pubmed-article:18323628pubmed:affiliationDepartment of Biotechnology, School of Engineering, Nagoya University, Chikusa, Nagoya 464-8603, Japan.lld:pubmed
pubmed-article:18323628pubmed:publicationTypeJournal Articlelld:pubmed
pubmed-article:18323628pubmed:publicationTypeResearch Support, Non-U.S. Gov'tlld:pubmed
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